RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 C9IYK1 514 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 HTRA2O43464 458 aaPredicted RBP15.69■□□□□ 0.1
SMG6-207ENST00000570756 GRAP2O75791 330 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 CSPG5O95196 566 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 VDRP11473 427 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 C21orf59P57076 290 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 TRAP1Q12931 704 aaKnown RBP15.69■□□□□ 0.1
SMG6-207ENST00000570756 BAATQ14032 418 aaPredicted RBP15.69■□□□□ 0.1
SMG6-207ENST00000570756 CA9Q16790 459 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 FAM47BQ8NA70 645 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 HTR3CQ8WXA8 447 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 PBXIP1Q96AQ6 731 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 ZNF302Q9NR11 478 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 MRGBPQ9NV56 204 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 CLEC11AQ9Y240 323 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.69■□□□□ 0.1
SMG6-207ENST00000570756 TRIM43BA6NCK2 446 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 CHRNGP07510 517 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 TFEBP19484 476 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 SLC7A1P30825 629 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 TGFBIQ15582 683 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 MTX3Q5HYI7 312 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 LIPMQ5VYY2 423 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 BSPRYQ5W0U4 402 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 ZBTB49Q6ZSB9 765 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 CLEC14AQ86T13 490 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 FAM156AQ8NDB6 213 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 ADAMTS16Q8TE57 1224 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 CNKSR2Q8WXI2 1034 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 ITPKCQ96DU7 683 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 NPAS2Q99743 824 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 ELOVL4Q9GZR5 314 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 CCDC68Q9H2F9 335 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 DOCK5Q9H7D0 1870 aa15.69■□□□□ 0.1
SMG6-207ENST00000570756 FUOMA2VDF0 154 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 HACD1B0YJ81 288 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.68■□□□□ 0.1
SMG6-207ENST00000570756 FBP2O00757 339 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 GIPC1O14908 333 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 B4GALT4O60513 344 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 CILPO75339 1184 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 E2F6O75461 281 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 YBX3P16989 372 aaKnown RBP eCLIP15.68■□□□□ 0.1
SMG6-207ENST00000570756 FGFR3P22607 806 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 GMPRP36959 345 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 CCR3P51677 355 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 CDH15P55291 814 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 PSME3P61289 254 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 DCDC5Q6ZRR9 648 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 STRA8Q7Z7C7 330 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 HERC6Q8IVU3 1022 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 COLGALT1Q8NBJ5 622 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 SLC7A14Q8TBB6 771 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 UBA3Q8TBC4 463 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 ADAM32Q8TC27 787 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 NSUN6Q8TEA1 469 aaKnown RBP15.68■□□□□ 0.1
SMG6-207ENST00000570756 DUS3LQ96G46 650 aaKnown RBP15.68■□□□□ 0.1
SMG6-207ENST00000570756 HEXIM2Q96MH2 286 aaKnown RBP15.68■□□□□ 0.1
SMG6-207ENST00000570756 AGAP3Q96P47 875 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 TWNKQ96RR1 684 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 UHRF1Q96T88 793 aaPredicted RBP15.68■□□□□ 0.1
SMG6-207ENST00000570756 CIB1Q99828 191 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 IL22Q9GZX6 179 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 PALMDQ9NP74 551 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 SYBUQ9NX95 663 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 SELENONQ9NZV5 590 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 MAFBQ9Y5Q3 323 aaPredicted RBP15.68■□□□□ 0.1
SMG6-207ENST00000570756 TCAF2A6NFQ2 919 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 GRID2O43424 1007 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 MSCO60682 206 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 BAIAP3O94812 1187 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 PIGNO95427 931 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 STAMBPO95630 424 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 LTFP02788 710 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 HSPA1AP0DMV8 641 aaKnown RBP15.68■□□□□ 0.1
SMG6-207ENST00000570756 HSPA1BP0DMV9 641 aaKnown RBP15.68■□□□□ 0.1
SMG6-207ENST00000570756 GRIA4P48058 902 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 PPIL2Q13356 520 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 BTG3Q14201 252 aaPredicted RBP15.68■□□□□ 0.1
SMG6-207ENST00000570756 ANKDD1AQ495B1 522 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 FSTL4Q6MZW2 842 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 TTC33Q6PID6 262 aaPredicted RBP15.68■□□□□ 0.1
SMG6-207ENST00000570756 PLEKHA8Q96JA3 519 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 TSNARE1Q96NA8 513 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 HNRNPABQ99729 332 aaKnown RBP15.68■□□□□ 0.1
SMG6-207ENST00000570756 UNC93B1Q9H1C4 597 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 SLC38A7Q9NVC3 462 aa15.68■□□□□ 0.1
SMG6-207ENST00000570756 COPG1Q9Y678 874 aaKnown RBP15.68■□□□□ 0.1
SMG6-207ENST00000570756 HEATR9A2RTY3 570 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 ESRRBO95718 433 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 STX5Q13190 355 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 DPYSL2Q16555 572 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 ARL13AQ5H913 290 aaPredicted RBP15.67■□□□□ 0.1
SMG6-207ENST00000570756 NHSL2Q5HYW2 709 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 TMEM198Q66K66 360 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 PPP4R4Q6NUP7 873 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 C16orf87Q6PH81 154 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 ZYG11AQ6WRX3 759 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 DPH6Q7L8W6 267 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 URGCPQ8TCY9 931 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms