RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 CD70P32970 193 aa15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 VPS41P49754 854 aa15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 CLCN6P51797 869 aa15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 SLC7A5Q01650 507 aa15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 ZNF33AQ06730 810 aa15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 NR1H3Q13133 447 aa15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 PUS10Q3MIT2 529 aaKnown RBP15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 PRUNE1Q86TP1 453 aa15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 PLCD3Q8N3E9 789 aa15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 NAT16Q8N8M0 369 aa15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 RTP4Q96DX8 246 aa15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 XPO6Q96QU8 1125 aaKnown RBP15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 RAB17Q9H0T7 212 aa15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 BRD9Q9H8M2 597 aa15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 USP29Q9HBJ7 922 aa15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 ABCB8Q9NUT2 735 aa15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 HPCAL4Q9UM19 191 aa15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 A0A0C4DFX4 3053 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 J3KR12 359 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 CBX4O00257 560 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 CACNG3O60359 315 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 PRAMEF11O60813 436 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 NEBLO76041 1014 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 ETS1P14921 441 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 PTPN3P26045 913 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 ACTN2P35609 894 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 NRLP54845 237 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 TFF2Q03403 129 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 IL10RBQ08334 325 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 RUNX3Q13761 415 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 ERCC6LQ2NKX8 1250 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 DCAF4L2Q8NA75 395 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 GLIS1Q8NBF1 620 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 TTC8Q8TAM2 541 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 CCHCR1Q8TD31 782 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 USP33Q8TEY7 942 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 NSMCE1Q8WV22 266 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 FEM1AQ9BSK4 669 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 CEP41Q9BYV8 373 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 SLC2A11Q9BYW1 496 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 TRIM31Q9BZY9 425 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 PRDM6Q9NQX0 595 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 DNAJC17Q9NVM6 304 aaKnown RBP15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 KLHL8Q9P2G9 620 aaPredicted RBP15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 GGA2Q9UJY4 613 aa15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 UTP11Q9Y3A2 253 aaKnown RBP15.75■□□□□ 0.11
HERPUD1-219ENST00000570273 VCANP13611 3396 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 A0A0A0MRY4 1105 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 MATN3O15232 486 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 KDELR3O43731 214 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 SNAP91O60641 907 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 ZSCAN5DPP0CG00 497 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 PABPC1P11940 636 aaKnown RBP15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 GLDCP23378 1020 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 HLA-FP30511 346 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 IFI35P80217 286 aaPredicted RBP15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 GUCY2DQ02846 1103 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 WASHC5Q12768 1159 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 ZBTB17Q13105 803 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 SLC12A1Q13621 1099 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 AAK1Q2M2I8 961 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 P3H1Q32P28 736 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 PLEKHG6Q3KR16 790 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 FAM182AQ5T1J6 154 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 ASTLQ6HA08 431 aaPredicted RBP15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 LEKR1Q6ZMV7 388 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 ARHGEF18Q6ZSZ5 1173 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 C12orf40Q86WS4 652 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 CCDC110Q8TBZ0 833 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 SPATA13Q96N96 652 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 ERP44Q9BS26 406 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 C2orf49Q9BVC5 232 aaPredicted RBP15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 ACE2Q9BYF1 805 aaPredicted RBP15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 DPH5Q9H2P9 285 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 PAK5Q9P286 719 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 LIMD1Q9UGP4 676 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 DMGDHQ9UI17 866 aaKnown RBP15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 NEU2Q9Y3R4 380 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 OR51B4Q9Y5P0 310 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 C5orf42Q9H799 3197 aa15.74■□□□□ 0.11
HERPUD1-219ENST00000570273 C5orf60A6NFR6 353 aa15.73■□□□□ 0.11
HERPUD1-219ENST00000570273 ZSCAN5CA6NGD5 496 aaPredicted RBP15.73■□□□□ 0.11
HERPUD1-219ENST00000570273 OTOL1A6NHN0 477 aaPredicted RBP15.73■□□□□ 0.11
HERPUD1-219ENST00000570273 OPHN1O60890 802 aa15.73■□□□□ 0.11
HERPUD1-219ENST00000570273 GCATO75600 419 aa15.73■□□□□ 0.11
HERPUD1-219ENST00000570273 JCHAINP01591 159 aa15.73■□□□□ 0.11
HERPUD1-219ENST00000570273 CCNB1P14635 433 aa15.73■□□□□ 0.11
HERPUD1-219ENST00000570273 IL9P15248 144 aa15.73■□□□□ 0.11
HERPUD1-219ENST00000570273 RPL22P35268 128 aaKnown RBP15.73■□□□□ 0.11
HERPUD1-219ENST00000570273 DGKGP49619 791 aa15.73■□□□□ 0.11
HERPUD1-219ENST00000570273 GPS1Q13098 491 aa15.73■□□□□ 0.11
HERPUD1-219ENST00000570273 ELF2Q15723 593 aa15.73■□□□□ 0.11
HERPUD1-219ENST00000570273 ITPRIPL2Q3MIP1 535 aa15.73■□□□□ 0.11
HERPUD1-219ENST00000570273 FUT11Q495W5 492 aa15.73■□□□□ 0.11
HERPUD1-219ENST00000570273 PITRM1Q5JRX3 1037 aa15.73■□□□□ 0.11
HERPUD1-219ENST00000570273 TMCO4Q5TGY1 634 aa15.73■□□□□ 0.11
HERPUD1-219ENST00000570273 GRAMD4Q6IC98 578 aa15.73■□□□□ 0.11
HERPUD1-219ENST00000570273 APCDD1Q8J025 514 aa15.73■□□□□ 0.11
HERPUD1-219ENST00000570273 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.73■□□□□ 0.11
HERPUD1-219ENST00000570273 CSGALNACT1Q8TDX6 532 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms