RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 ITGB1P05556 798 aa8.94□□□□□ -0.98
LINC00558-201ENST00000569422 GSTA2P09210 222 aa8.94□□□□□ -0.98
LINC00558-201ENST00000569422 NMBRP28336 390 aa8.94□□□□□ -0.98
LINC00558-201ENST00000569422 GP5P40197 560 aa8.94□□□□□ -0.98
LINC00558-201ENST00000569422 CCR10P46092 362 aa8.94□□□□□ -0.98
LINC00558-201ENST00000569422 RPL34P49207 117 aaKnown RBP8.94□□□□□ -0.98
LINC00558-201ENST00000569422 PGFP49763 221 aa8.94□□□□□ -0.98
LINC00558-201ENST00000569422 EPHB1P54762 984 aa8.94□□□□□ -0.98
LINC00558-201ENST00000569422 SIM2Q14190 667 aaPredicted RBP8.94□□□□□ -0.98
LINC00558-201ENST00000569422 TBC1D25Q3MII6 688 aa8.94□□□□□ -0.98
LINC00558-201ENST00000569422 XKR4Q5GH76 650 aa8.94□□□□□ -0.98
LINC00558-201ENST00000569422 CFAP157Q5JU67 520 aa8.94□□□□□ -0.98
LINC00558-201ENST00000569422 FSTL4Q6MZW2 842 aa8.94□□□□□ -0.98
LINC00558-201ENST00000569422 PIWIL2Q8TC59 973 aaKnown RBP8.94□□□□□ -0.98
LINC00558-201ENST00000569422 BHMTQ93088 406 aa8.94□□□□□ -0.98
LINC00558-201ENST00000569422 CCDC124Q96CT7 223 aaKnown RBP8.94□□□□□ -0.98
LINC00558-201ENST00000569422 SLC39A13Q96H72 371 aa8.94□□□□□ -0.98
LINC00558-201ENST00000569422 SLC2A13Q96QE2 648 aa8.94□□□□□ -0.98
LINC00558-201ENST00000569422 KATNAL1Q9BW62 490 aa8.94□□□□□ -0.98
LINC00558-201ENST00000569422 LRRC40Q9H9A6 602 aa8.94□□□□□ -0.98
LINC00558-201ENST00000569422 LNPEPQ9UIQ6 1025 aa8.94□□□□□ -0.98
LINC00558-201ENST00000569422 PACSIN3Q9UKS6 424 aa8.94□□□□□ -0.98
LINC00558-201ENST00000569422 A0A096LPK6 155 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 NEMP1O14524 444 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 PMPCBO75439 489 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 RALBP11234 206 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 FGF3P11487 239 aaPredicted RBP8.93□□□□□ -0.98
LINC00558-201ENST00000569422 LRPAP1P30533 357 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 ARRB2P32121 409 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 GARSP41250 739 aaKnown RBP8.93□□□□□ -0.98
LINC00558-201ENST00000569422 LHX1P48742 406 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 TRIM32Q13049 653 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 ZNF460Q14592 562 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 PCLAFQ15004 111 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 PAFAH1B3Q15102 231 aaKnown RBP8.93□□□□□ -0.98
LINC00558-201ENST00000569422 PCSK7Q16549 785 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.93□□□□□ -0.98
LINC00558-201ENST00000569422 ANKRD20A4Q4UJ75 823 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 TEDDM1Q5T9Z0 273 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 CST9Q5W186 159 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 MBLAC2Q68D91 279 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 MARK2Q7KZI7 788 aaKnown RBP8.93□□□□□ -0.98
LINC00558-201ENST00000569422 GPR152Q8TDT2 470 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 NT5C3BQ969T7 300 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 TTC1Q99614 292 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 MLPHQ9BV36 600 aaPredicted RBP8.93□□□□□ -0.98
LINC00558-201ENST00000569422 PIF1Q9H611 641 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 ACAD8Q9UKU7 415 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 APOBEC2Q9Y235 224 aaKnown RBP8.93□□□□□ -0.98
LINC00558-201ENST00000569422 SBF1O95248 1867 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 TRIP12Q14669 1992 aaPredicted RBP8.93□□□□□ -0.98
LINC00558-201ENST00000569422 ZNF487B1APH4 448 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 E9PBE3 544 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 KLF11O14901 512 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 KLHL41O60662 606 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 AP2A1O95782 977 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 GSRP00390 522 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 MLNP12872 115 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 CPA3P15088 417 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 SCNN1AP37088 669 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 GRIK1P39086 918 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 CTBP1Q13363 440 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 SEPT6Q14141 434 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 PCBP1Q15365 356 aaKnown RBP eCLIP8.93□□□□□ -0.98
LINC00558-201ENST00000569422 ARCQ7LC44 396 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 LRRTM3Q86VH5 581 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 KCNMB4Q86W47 210 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 KCTD13Q8WZ19 329 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 SGF29Q96ES7 293 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 NAF1Q96HR8 494 aaKnown RBP8.93□□□□□ -0.98
LINC00558-201ENST00000569422 GORASP1Q9BQQ3 440 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 ARHGAP39Q9C0H5 1083 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 NDFIP2Q9NV92 336 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 SLC38A7Q9NVC3 462 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 MPP6Q9NZW5 540 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 RCOR3Q9P2K3 495 aaPredicted RBP8.93□□□□□ -0.98
LINC00558-201ENST00000569422 DCDC2Q9UHG0 476 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 MAFFQ9ULX9 164 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 NOD1Q9Y239 953 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 FIS1Q9Y3D6 152 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 WASF2Q9Y6W5 498 aa8.93□□□□□ -0.98
LINC00558-201ENST00000569422 TRAFD1O14545 582 aaPredicted RBP8.92□□□□□ -0.98
LINC00558-201ENST00000569422 MGEA5O60502 916 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 ALDH1A2O94788 518 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 SORBS2O94875 1100 aaKnown RBP8.92□□□□□ -0.98
LINC00558-201ENST00000569422 HSPA4LO95757 839 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 IMPDH2P12268 514 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 MYCLP1P12525 358 aaPredicted RBP8.92□□□□□ -0.98
LINC00558-201ENST00000569422 SPRP35270 261 aaPredicted RBP8.92□□□□□ -0.98
LINC00558-201ENST00000569422 IRX1P78414 480 aaPredicted RBP8.92□□□□□ -0.98
LINC00558-201ENST00000569422 LRRC36Q1X8D7 754 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 RALGPS1Q5JS13 557 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 WASHC2DQ5SRD0 308 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 AGAP9Q5VTM2 703 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 KYAT3Q6YP21 454 aaKnown RBP8.92□□□□□ -0.98
LINC00558-201ENST00000569422 LCA5Q86VQ0 697 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 SMARCD1Q96GM5 515 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 DHRS1Q96LJ7 313 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 TUBB6Q9BUF5 446 aa8.92□□□□□ -0.98
LINC00558-201ENST00000569422 TASP1Q9H6P5 420 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms