RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 GPBP1Q86WP2 473 aa6.16□□□□□ -1.42
CDH13-212ENST00000569144 CCDC83Q8IWF9 413 aa6.16□□□□□ -1.42
CDH13-212ENST00000569144 Q8N3U1 123 aa6.16□□□□□ -1.42
CDH13-212ENST00000569144 KCT2Q8NC54 265 aa6.16□□□□□ -1.42
CDH13-212ENST00000569144 SCAMP5Q8TAC9 235 aa6.16□□□□□ -1.42
CDH13-212ENST00000569144 HVCN1Q96D96 273 aa6.16□□□□□ -1.42
CDH13-212ENST00000569144 P2RY11Q96G91 374 aa6.16□□□□□ -1.42
CDH13-212ENST00000569144 HPDLQ96IR7 371 aa6.16□□□□□ -1.42
CDH13-212ENST00000569144 PIWIL1Q96J94 861 aaKnown RBP6.16□□□□□ -1.42
CDH13-212ENST00000569144 CDK5RAP3Q96JB5 506 aa6.16□□□□□ -1.42
CDH13-212ENST00000569144 C8orf76Q96K31 380 aa6.16□□□□□ -1.42
CDH13-212ENST00000569144 DEPDC7Q96QD5 511 aa6.16□□□□□ -1.42
CDH13-212ENST00000569144 PLIN2Q99541 437 aa6.16□□□□□ -1.42
CDH13-212ENST00000569144 FAM213AQ9BRX8 229 aa6.16□□□□□ -1.42
CDH13-212ENST00000569144 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.16□□□□□ -1.42
CDH13-212ENST00000569144 B3GNT5Q9BYG0 378 aa6.16□□□□□ -1.42
CDH13-212ENST00000569144 MTMR12Q9C0I1 747 aa6.16□□□□□ -1.42
CDH13-212ENST00000569144 WNT10AQ9GZT5 417 aa6.16□□□□□ -1.42
CDH13-212ENST00000569144 POLR1BQ9H9Y6 1135 aa6.16□□□□□ -1.42
CDH13-212ENST00000569144 FBRSQ9HAH7 460 aa6.16□□□□□ -1.42
CDH13-212ENST00000569144 RBAKQ9NYW8 714 aaPredicted RBP6.16□□□□□ -1.42
CDH13-212ENST00000569144 NME7Q9Y5B8 376 aa6.16□□□□□ -1.42
CDH13-212ENST00000569144 A0A1W2PR77 199 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 CLDN5O00501 218 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 TIMM44O43615 452 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 USP12O75317 370 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 TBCAO75347 108 aaKnown RBP6.15□□□□□ -1.42
CDH13-212ENST00000569144 LEFTY1O75610 366 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 MED26O95402 600 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 BPNT1O95861 308 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 DNTTP04053 509 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 FAM163BP0C2L3 166 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 MYF5P13349 255 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 ITGB6P18564 788 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 CD38P28907 300 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 ATP5C1P36542 298 aaKnown RBP6.15□□□□□ -1.42
CDH13-212ENST00000569144 GNL1P36915 607 aaPredicted RBP6.15□□□□□ -1.42
CDH13-212ENST00000569144 CD97P48960 835 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 NXPH1P58417 271 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 RPS14P62263 151 aaKnown RBP6.15□□□□□ -1.42
CDH13-212ENST00000569144 NFKB2Q00653 900 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 ARID5AQ03989 594 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 BNIP3Q12983 259 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 GNL2Q13823 731 aaKnown RBP6.15□□□□□ -1.42
CDH13-212ENST00000569144 ARL13BQ3SXY8 428 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 LINC00303Q3SY05 128 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 TTC31Q49AM3 519 aaPredicted RBP6.15□□□□□ -1.42
CDH13-212ENST00000569144 KLHDC10Q6PID8 442 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 GOLM1Q8NBJ4 401 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 B3GALNT2Q8NCR0 500 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 ZSWIM2Q8NEG5 633 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 OR6B3Q8NGW1 331 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 GATAD2BQ8WXI9 593 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 GOLGA1Q92805 767 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 MRRFQ96E11 262 aaKnown RBP6.15□□□□□ -1.42
CDH13-212ENST00000569144 SAAL1Q96ER3 474 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 ANKRD36BP1Q96IX9 119 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 FAM84AQ96KN4 292 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 PSMG3-AS1Q96PY0 264 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 KCNK16Q96T55 309 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 MRPL45Q9BRJ2 306 aaKnown RBP6.15□□□□□ -1.42
CDH13-212ENST00000569144 CIPCQ9C0C6 399 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 IKZF4Q9H2S9 585 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 TMEM245Q9H330 911 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 SNX25Q9H3E2 840 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 DPEP3Q9H4B8 488 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 ZHX3Q9H4I2 956 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 ERVMER34-1Q9H9K5 563 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 LRRC4CQ9HCJ2 640 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 DMAP1Q9NPF5 467 aaPredicted RBP6.15□□□□□ -1.42
CDH13-212ENST00000569144 TLR8Q9NR97 1041 aaKnown RBP6.15□□□□□ -1.42
CDH13-212ENST00000569144 ZNF510Q9Y2H8 683 aa6.15□□□□□ -1.42
CDH13-212ENST00000569144 USP9XQ93008 2570 aaPredicted RBP6.15□□□□□ -1.42
CDH13-212ENST00000569144 BSNQ9UPA5 3926 aa6.15□□□□□ -1.43
CDH13-212ENST00000569144 ATP8B3O60423 1300 aa6.15□□□□□ -1.43
CDH13-212ENST00000569144 KNTC1P50748 2209 aa6.14□□□□□ -1.43
CDH13-212ENST00000569144 FAM221AA4D161 298 aa6.14□□□□□ -1.43
CDH13-212ENST00000569144 CLEC18AA5D8T8 446 aa6.14□□□□□ -1.43
CDH13-212ENST00000569144 C10orf142B7Z368 130 aa6.14□□□□□ -1.43
CDH13-212ENST00000569144 TLR4O00206 839 aa6.14□□□□□ -1.43
CDH13-212ENST00000569144 CYP26A1O43174 497 aa6.14□□□□□ -1.43
CDH13-212ENST00000569144 SLC26A4O43511 780 aa6.14□□□□□ -1.43
CDH13-212ENST00000569144 OPA1O60313 960 aa6.14□□□□□ -1.43
CDH13-212ENST00000569144 CSO75390 466 aaKnown RBP6.14□□□□□ -1.43
CDH13-212ENST00000569144 TBX18O95935 607 aa6.14□□□□□ -1.43
CDH13-212ENST00000569144 RECKO95980 971 aa6.14□□□□□ -1.43
CDH13-212ENST00000569144 TNNC2P02585 160 aa6.14□□□□□ -1.43
CDH13-212ENST00000569144 KRT18P05783 430 aaKnown RBP6.14□□□□□ -1.43
CDH13-212ENST00000569144 CENPBP07199 599 aaPredicted RBP6.14□□□□□ -1.43
CDH13-212ENST00000569144 SFTPCP11686 197 aa6.14□□□□□ -1.43
CDH13-212ENST00000569144 FOSL1P15407 271 aa6.14□□□□□ -1.43
CDH13-212ENST00000569144 GARTP22102 1010 aa6.14□□□□□ -1.43
CDH13-212ENST00000569144 RBMS1P29558 406 aaKnown RBP6.14□□□□□ -1.43
CDH13-212ENST00000569144 CHKAP35790 457 aa6.14□□□□□ -1.43
CDH13-212ENST00000569144 PGFP49763 221 aa6.14□□□□□ -1.43
CDH13-212ENST00000569144 TOB1P50616 345 aaPredicted RBP6.14□□□□□ -1.43
CDH13-212ENST00000569144 TLE1Q04724 770 aa6.14□□□□□ -1.43
CDH13-212ENST00000569144 CYP27C1Q4G0S4 372 aa6.14□□□□□ -1.43
CDH13-212ENST00000569144 SLC45A4Q5BKX6 768 aa6.14□□□□□ -1.43
CDH13-212ENST00000569144 ERICH6BQ5W0A0 696 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms