RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 RALYQ9UKM9 306 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-208ENST00000567843 CHD6Q8TD26 2715 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 DRGXA6NNA5 263 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 E9PAM4 449 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 RNF103O00237 685 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 SMAD6O43541 496 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 ATP9BO43861 1147 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 LSM8O95777 96 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 F9P00740 461 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 TPM2P07951 284 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 ATXN1LP0C7T5 689 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 SRCP12931 536 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 RRM1P23921 792 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 RDXP35241 583 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 SOX5P35711 763 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 CTSKP43235 329 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 ADPRHP54922 357 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 RACK1P63244 317 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 FMO1Q01740 532 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 CNTN1Q12860 1018 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 C15orf59Q2T9L4 293 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 CT47A1Q5JQC4 288 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 LRRC31Q6UY01 552 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 MARCH9Q86YJ5 346 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 GATAD2AQ86YP4 633 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 SH2D3CQ8N5H7 860 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 ATP11CQ8NB49 1132 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 JOSD2Q8TAC2 188 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 PIP4K2CQ8TBX8 421 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 RXFP2Q8WXD0 754 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 KLK6Q92876 244 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 GATA6Q92908 595 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 GBP4Q96PP9 640 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 PCDHB18PQ96TA0 734 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 ACE2Q9BYF1 805 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 TNKS2Q9H2K2 1166 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 ADAMTS1Q9UHI8 967 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 VPS51Q9UID3 782 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 ZMIZ1Q9ULJ6 1067 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 FZD4Q9ULV1 537 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 CA5BQ9Y2D0 317 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 TBC1D30Q9Y2I9 924 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 NEUROG3Q9Y4Z2 214 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 ACTL7AQ9Y615 435 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 ZFYVE26Q68DK2 2539 aa12.54□□□□□ -0.4
GTF3C1-208ENST00000567843 GOLGA4Q13439 2230 aaKnown RBP12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 CBX4O00257 560 aa12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 CYP1A1P04798 512 aaPredicted RBP12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 CDK11BP21127 795 aaKnown RBP12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 STAT1P42224 750 aa12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 CDR2Q01850 454 aa12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 HNRNPDQ14103 355 aaKnown RBP12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 ZNF423Q2M1K9 1284 aa12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 C5orf22Q49AR2 442 aa12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 RBM43Q6ZSC3 357 aaKnown RBP12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 RAB44Q7Z6P3 723 aaPredicted RBP12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 DRC7Q8IY82 874 aa12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 CHST14Q8NCH0 376 aa12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 MSANTD4Q8NCY6 345 aa12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 PGAP3Q96FM1 320 aaPredicted RBP12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 SERAC1Q96JX3 654 aa12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 PPP1R9BQ96SB3 815 aa12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 MYOCQ99972 504 aa12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 OSGEPQ9NPF4 335 aa12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 SEPT11Q9NVA2 429 aaKnown RBP12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 ANO10Q9NW15 660 aa12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 PPM1HQ9ULR3 514 aa12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 SIK3Q9Y2K2 1263 aa12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 SPEGQ15772 3267 aa12.53□□□□□ -0.4
GTF3C1-208ENST00000567843 ASPMQ8IZT6 3477 aa12.52□□□□□ -0.4
GTF3C1-208ENST00000567843 KPNA3O00505 521 aaPredicted RBP12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 MCF2LO15068 1137 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 VILLO15195 856 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 FLRT2O43155 660 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 TRIM16O95361 564 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 CTSLP07711 333 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 ZNF883P0CG24 379 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 MMP8P22894 467 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 CD38P28907 300 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 OR1E1P30953 314 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 SCNN1AP37088 669 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 CCT8P50990 548 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 DNA2P51530 1060 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 CCR5P51681 352 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 JAM2P57087 298 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 KRT83P78385 493 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 UBXN1Q04323 297 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 MTA1Q13330 715 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 SUZ12Q15022 739 aaKnown RBP12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 STX1AQ16623 288 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 CCDC14Q49A88 953 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 ARTNQ5T4W7 220 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 FAM46CQ5VWP2 391 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 LEKR1Q6ZMV7 388 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 DSG4Q86SJ6 1040 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 NEK11Q8NG66 645 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 GRIN3AQ8TCU5 1115 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 ZCCHC14Q8WYQ9 949 aaKnown RBP12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 ARRDC3Q96B67 414 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 C2orf49Q9BVC5 232 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms