RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 H0YIN7 160 aa25.48■■□□□ 1.67
FANCA-221ENST00000566889 NOL3O60936 208 aaKnown RBP25.48■■□□□ 1.67
FANCA-221ENST00000566889 CNOT3O75175 753 aaKnown RBP25.48■■□□□ 1.67
FANCA-221ENST00000566889 PDGFRAP16234 1089 aa25.48■■□□□ 1.67
FANCA-221ENST00000566889 TFEBP19484 476 aa25.48■■□□□ 1.67
FANCA-221ENST00000566889 BMXP51813 675 aa25.48■■□□□ 1.67
FANCA-221ENST00000566889 EMC2Q15006 297 aa25.48■■□□□ 1.67
FANCA-221ENST00000566889 SURF1Q15526 300 aa25.48■■□□□ 1.67
FANCA-221ENST00000566889 ANKRD26P1Q6NSI1 321 aa25.48■■□□□ 1.67
FANCA-221ENST00000566889 HMBOX1Q6NT76 420 aa25.48■■□□□ 1.67
FANCA-221ENST00000566889 CLEC14AQ86T13 490 aa25.48■■□□□ 1.67
FANCA-221ENST00000566889 SIX6OS1Q8N1H7 587 aa25.48■■□□□ 1.67
FANCA-221ENST00000566889 RDH11Q8TC12 318 aa25.48■■□□□ 1.67
FANCA-221ENST00000566889 TCF12Q99081 682 aa25.48■■□□□ 1.67
FANCA-221ENST00000566889 NOL11Q9H8H0 719 aaKnown RBP25.48■■□□□ 1.67
FANCA-221ENST00000566889 TRPC7Q9HCX4 862 aa25.48■■□□□ 1.67
FANCA-221ENST00000566889 SCHIP1Q9P0W5 487 aaPredicted RBP25.48■■□□□ 1.67
FANCA-221ENST00000566889 HEATR9A2RTY3 570 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 TESPA1A2RU30 521 aaPredicted RBP25.47■■□□□ 1.67
FANCA-221ENST00000566889 CFAP99D6REC4 459 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 EIF2B2P49770 351 aaKnown RBP25.47■■□□□ 1.67
FANCA-221ENST00000566889 PRAMEP78395 509 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 NSUN2Q08J23 767 aaKnown RBP eCLIP25.47■■□□□ 1.67
FANCA-221ENST00000566889 NR1D2Q14995 579 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 MEX3CQ5U5Q3 659 aaKnown RBP25.47■■□□□ 1.67
FANCA-221ENST00000566889 SWSAP1Q6NVH7 229 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 CHSY3Q70JA7 882 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 PTF1AQ7RTS3 328 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 CMC1Q7Z7K0 106 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 RBBP8Q99708 897 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 IL22Q9GZX6 179 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 NMRAL1Q9HBL8 299 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 SEPT3Q9UH03 358 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 CNOT6Q9ULM6 557 aaKnown RBP25.47■■□□□ 1.67
FANCA-221ENST00000566889 LRRIQ4A6NIV6 560 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.47■■□□□ 1.67
FANCA-221ENST00000566889 NR2C2P49116 596 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 PRKCEQ02156 737 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 GPR107Q5VW38 600 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 EGFLAMQ63HQ2 1017 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 NXNQ6DKJ4 435 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 ARNTL2Q8WYA1 636 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 LPGAT1Q92604 370 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 QKIQ96PU8 341 aaKnown RBP eCLIP25.47■■□□□ 1.676e-12■□□□□ 9
FANCA-221ENST00000566889 TUBA1CQ9BQE3 449 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 PDCD2LQ9BRP1 358 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 C1orf50Q9BV19 199 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 UNKQ9C0B0 810 aaKnown RBP25.47■■□□□ 1.67
FANCA-221ENST00000566889 TMEM134Q9H6X4 195 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 EIF2B3Q9NR50 452 aaKnown RBP25.47■■□□□ 1.67
FANCA-221ENST00000566889 SARDHQ9UL12 918 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 TMEM98Q9Y2Y6 226 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 TSC22D4Q9Y3Q8 395 aa25.47■■□□□ 1.67
FANCA-221ENST00000566889 COPG1Q9Y678 874 aaKnown RBP25.47■■□□□ 1.67
FANCA-221ENST00000566889 TRIM24O15164 1050 aa25.46■■□□□ 1.67
FANCA-221ENST00000566889 MAP3K6O95382 1288 aa25.46■■□□□ 1.67
FANCA-221ENST00000566889 CHRNGP07510 517 aa25.46■■□□□ 1.67
FANCA-221ENST00000566889 CAP2P40123 477 aa25.46■■□□□ 1.67
FANCA-221ENST00000566889 PRKCQQ04759 706 aa25.46■■□□□ 1.67
FANCA-221ENST00000566889 GALNT2Q10471 571 aa25.46■■□□□ 1.67
FANCA-221ENST00000566889 GRSF1Q12849 480 aaKnown RBP eCLIP25.46■■□□□ 1.67
FANCA-221ENST00000566889 RAB39AQ14964 217 aa25.46■■□□□ 1.67
FANCA-221ENST00000566889 SEZ6Q53EL9 994 aa25.46■■□□□ 1.67
FANCA-221ENST00000566889 FGD3Q5JSP0 725 aa25.46■■□□□ 1.67
FANCA-221ENST00000566889 INTS11Q5TA45 600 aaKnown RBP25.46■■□□□ 1.67
FANCA-221ENST00000566889 CAMK1DQ8IU85 385 aa25.46■■□□□ 1.67
FANCA-221ENST00000566889 HACE1Q8IYU2 909 aa25.46■■□□□ 1.67
FANCA-221ENST00000566889 PDPRQ8NCN5 879 aa25.46■■□□□ 1.67
FANCA-221ENST00000566889 ADAM32Q8TC27 787 aa25.46■■□□□ 1.67
FANCA-221ENST00000566889 ARMC7Q9H6L4 198 aa25.46■■□□□ 1.67
FANCA-221ENST00000566889 WDR81Q562E7 1941 aa25.46■■□□□ 1.67
FANCA-221ENST00000566889 PIK3R2O00459 728 aa25.45■■□□□ 1.67
FANCA-221ENST00000566889 POLBP06746 335 aa25.45■■□□□ 1.67
FANCA-221ENST00000566889 LIMK2P53671 638 aa25.45■■□□□ 1.67
FANCA-221ENST00000566889 STX5Q13190 355 aa25.45■■□□□ 1.67
FANCA-221ENST00000566889 PMS2P3Q13401 168 aa25.45■■□□□ 1.67
FANCA-221ENST00000566889 C15orf59Q2T9L4 293 aaPredicted RBP25.45■■□□□ 1.67
FANCA-221ENST00000566889 LIPMQ5VYY2 423 aa25.45■■□□□ 1.67
FANCA-221ENST00000566889 PPP1R36Q96LQ0 422 aa25.45■■□□□ 1.67
FANCA-221ENST00000566889 PCDHAC1Q9H158 963 aa25.45■■□□□ 1.67
FANCA-221ENST00000566889 PORCNQ9H237 461 aa25.45■■□□□ 1.67
FANCA-221ENST00000566889 NRXN2Q9P2S2 1712 aa25.45■■□□□ 1.66
FANCA-221ENST00000566889 A0A096LPK6 155 aa25.45■■□□□ 1.66
FANCA-221ENST00000566889 MAFGO15525 162 aa25.45■■□□□ 1.66
FANCA-221ENST00000566889 PIGNO95427 931 aa25.45■■□□□ 1.66
FANCA-221ENST00000566889 MGAT1P26572 445 aa25.45■■□□□ 1.66
FANCA-221ENST00000566889 MAPRE2Q15555 327 aa25.45■■□□□ 1.66
FANCA-221ENST00000566889 SPANXN3Q5MJ09 141 aa25.45■■□□□ 1.66
FANCA-221ENST00000566889 TMEM198Q66K66 360 aa25.45■■□□□ 1.66
FANCA-221ENST00000566889 HEATR6Q6AI08 1181 aaKnown RBP25.45■■□□□ 1.66
FANCA-221ENST00000566889 XRRA1Q6P2D8 792 aa25.45■■□□□ 1.66
FANCA-221ENST00000566889 PPWD1Q96BP3 646 aaKnown RBP25.45■■□□□ 1.66
FANCA-221ENST00000566889 CERS2Q96G23 380 aa25.45■■□□□ 1.66
FANCA-221ENST00000566889 XYLT2Q9H1B5 865 aa25.45■■□□□ 1.66
FANCA-221ENST00000566889 ARMC1Q9NVT9 282 aa25.45■■□□□ 1.66
FANCA-221ENST00000566889 TMX2-CTNND1H3BSU7 103 aa25.44■■□□□ 1.66
FANCA-221ENST00000566889 KPNA4O00629 521 aaPredicted RBP25.44■■□□□ 1.66
FANCA-221ENST00000566889 SOCS2O14508 198 aa25.44■■□□□ 1.66
FANCA-221ENST00000566889 CRADDP78560 199 aa25.44■■□□□ 1.66
FANCA-221ENST00000566889 BNIP3Q12983 259 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms