RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, human

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-231	ENST00000566279	CASP10	Q92851	521 aa		10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	HLA-C	Q95604	372 aa		10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	RNF34	Q969K3	372 aa		10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	FUBP3	Q96I24	572 aa	Known RBP eCLIP	10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	MSLNL	Q96KJ4	702 aa		10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	MAGEB18	Q96M61	343 aa		10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	FERMT1	Q9BQL6	677 aa		10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	TRIM56	Q9BRZ2	755 aa	Known RBP	10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	NMUR1	Q9HB89	426 aa		10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	ABCC13	Q9NSE7	274 aa		10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	IGSF9	Q9P2J2	1179 aa		10.38	□□□□□ -0.75
TCF4-231	ENST00000566279	PCDHB5	Q9Y5E4	795 aa		10.38	□□□□□ -0.75
TCF4-231	ENST00000566279		A0A1W2PQH9	124 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	CXorf49	A8MYA2	514 aa	Predicted RBP	10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	MYO1C	O00159	1063 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	KCNK1	O00180	336 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	TRDMT1	O14717	391 aa	Known RBP	10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	NCAM2	O15394	837 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	MSI1	O43347	362 aa	Known RBP	10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	ZNF189	O75820	626 aa	Predicted RBP	10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	APOE	P02649	317 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	MLN	P12872	115 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	KRT4	P19013	534 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	EPHB2	P29323	1055 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	KCNQ1	P51787	676 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	IFT88	Q13099	833 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	NFE2	Q16621	373 aa	Predicted RBP	10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	ARTN	Q5T4W7	220 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	TPGS2	Q68CL5	300 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	LRRC8B	Q6P9F7	803 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	YTHDF3	Q7Z739	585 aa	Known RBP	10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	HS6ST3	Q8IZP7	471 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	ZNF707	Q96C28	371 aa	Predicted RBP	10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	HDAC11	Q96DB2	347 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	C8orf48	Q96LL4	319 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	GORASP1	Q9BQQ3	440 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	NSRP1	Q9H0G5	558 aa	Known RBP	10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	SMYD2	Q9NRG4	433 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	FGFR1OP2	Q9NVK5	253 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	SFMBT1	Q9UHJ3	866 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	GRID1	Q9ULK0	1009 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	MAD1L1	Q9Y6D9	718 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	BRWD1	Q9NSI6	2320 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	OAS1	P00973	400 aa	Known RBP	10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	INHBA	P08476	426 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	HAPLN1	P10915	354 aa	Predicted RBP	10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	TAC1	P20366	129 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	MX2	P20592	715 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	CA4	P22748	312 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	GARS	P41250	739 aa	Known RBP	10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	SARNP	P82979	210 aa	Known RBP	10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	IL9R	Q01113	521 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	SLC1A5	Q15758	541 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	BRMS1L	Q5PSV4	323 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	STEAP4	Q687X5	459 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	TMEM184A	Q6ZMB5	413 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	GRASP	Q7Z6J2	395 aa	Predicted RBP	10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	SLC26A11	Q86WA9	606 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	TCEAL8	Q8IYN2	117 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	CCDC197	Q8NCU1	140 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	GSDMB	Q8TAX9	411 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	SPPL2B	Q8TCT7	592 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	DEPDC1B	Q8WUY9	529 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	CABS1	Q96KC9	395 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	HAPLN3	Q96S86	360 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	ELAC2	Q9BQ52	826 aa	Known RBP	10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	BRD8	Q9H0E9	1235 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	S1PR5	Q9H228	398 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	SFXN1	Q9H9B4	322 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	OSER1	Q9NX31	292 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	SCML2	Q9UQR0	700 aa		10.37	□□□□□ -0.75
TCF4-231	ENST00000566279	GREB1	Q4ZG55	1949 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	IQANK1	A0A1B0GTG1	560 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	GRXCR2	A6NFK2	248 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	TRIM66	O15016	1216 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	PAGE1	O75459	146 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	FAM155B	O75949	473 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	KIAA0754	O94854	1291 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	LRG1	P02750	347 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	GJA1	P17302	382 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	HOXC13	P31276	330 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	SERPINB6	P35237	376 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	MAGEA11	P43364	429 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	SPARCL1	Q14515	664 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	MANEAL	Q5VSG8	457 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	NUGGC	Q68CJ6	796 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	TRMT10B	Q6PF06	316 aa	Known RBP	10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	NUP93	Q8N1F7	819 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	PPM1N	Q8N819	430 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	BANP	Q8N9N5	519 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	SMG7	Q92540	1137 aa	Known RBP	10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	STAMBPL1	Q96FJ0	436 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	SERAC1	Q96JX3	654 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	KLF6	Q99612	283 aa	Predicted RBP	10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	PAIP2	Q9BPZ3	127 aa	Known RBP	10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	OXCT2	Q9BYC2	517 aa	Predicted RBP	10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	SAMD15	Q9P1V8	674 aa		10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	KLHL8	Q9P2G9	620 aa	Predicted RBP	10.36	□□□□□ -0.75
TCF4-231	ENST00000566279	DNMT3B	Q9UBC3	853 aa	Known RBP	10.36	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms