RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 NDUFA8P51970 172 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 OXCT1P55809 520 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 GABREP78334 506 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 DAB2P98082 770 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 VAC14Q08AM6 782 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 SYPL2Q5VXT5 272 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 TMEM270Q6UE05 265 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 KRBA2Q6ZNG9 492 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 CCAR2Q8N163 923 aaKnown RBP13.13□□□□□ -0.31
RNF40-208ENST00000565995 STK32AQ8WU08 396 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 KCNE4Q8WWG9 221 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 TRIM62Q9BVG3 475 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 SCAND2PQ9GZW5 306 aaPredicted RBP13.13□□□□□ -0.31
RNF40-208ENST00000565995 GDPD2Q9HCC8 539 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 GPR27Q9NS67 375 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.13□□□□□ -0.31
RNF40-208ENST00000565995 NLGN3Q9NZ94 848 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 CEP83Q9Y592 693 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 FLNCQ14315 2725 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 TCAF2A6NFQ2 919 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 C1QTNF3-AMACRE9PGA6 284 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 M0QYV0 167 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 SCAMP1O15126 338 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 CSO75390 466 aaKnown RBP13.12□□□□□ -0.31
RNF40-208ENST00000565995 PIAS2O75928 621 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 APOEP02649 317 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 DUSP3P51452 185 aaPredicted RBP13.12□□□□□ -0.31
RNF40-208ENST00000565995 MEA1Q16626 185 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 HS1BP3Q53T59 392 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 ZC3H12AQ5D1E8 599 aaKnown RBP13.12□□□□□ -0.31
RNF40-208ENST00000565995 PIP5KL1Q5T9C9 394 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 ARHGAP40Q5TG30 622 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 TCERG1LQ5VWI1 586 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 RAP1GAP2Q684P5 730 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 CXorf57Q6NSI4 855 aaKnown RBP13.12□□□□□ -0.31
RNF40-208ENST00000565995 ABI3BPQ7Z7G0 1075 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 TAC4Q86UU9 113 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 DCP2Q8IU60 420 aaKnown RBP13.12□□□□□ -0.31
RNF40-208ENST00000565995 LMO3Q8TAP4 145 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 MED8Q96G25 268 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 APOLD1Q96LR9 279 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 SLC46A1Q96NT5 459 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 FEM1AQ9BSK4 669 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 SLC4A5Q9BY07 1137 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 MIS12Q9H081 205 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 CLMPQ9H6B4 373 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 CNTN6Q9UQ52 1028 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 OR51B4Q9Y5P0 310 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 HS3ST3A1Q9Y663 406 aa13.12□□□□□ -0.31
RNF40-208ENST00000565995 NEMP2A6NFY4 417 aa13.11□□□□□ -0.31
RNF40-208ENST00000565995 F5H5T6 163 aa13.11□□□□□ -0.31
RNF40-208ENST00000565995 TRUB2O95900 331 aaKnown RBP13.11□□□□□ -0.31
RNF40-208ENST00000565995 MOCS2O96007 188 aaPredicted RBP13.11□□□□□ -0.31
RNF40-208ENST00000565995 ALPPL2P10696 532 aa13.11□□□□□ -0.31
RNF40-208ENST00000565995 PDGFRAP16234 1089 aa13.11□□□□□ -0.31
RNF40-208ENST00000565995 ACADSBP45954 432 aa13.11□□□□□ -0.31
RNF40-208ENST00000565995 FKBP3Q00688 224 aaKnown RBP13.11□□□□□ -0.31
RNF40-208ENST00000565995 DLG2Q15700 870 aa13.11□□□□□ -0.31
RNF40-208ENST00000565995 ISXQ2M1V0 245 aa13.11□□□□□ -0.31
RNF40-208ENST00000565995 ZNF284Q2VY69 593 aa13.11□□□□□ -0.31
RNF40-208ENST00000565995 C5orf22Q49AR2 442 aa13.11□□□□□ -0.31
RNF40-208ENST00000565995 SH2D3CQ8N5H7 860 aa13.11□□□□□ -0.31
RNF40-208ENST00000565995 ATP6V0D2Q8N8Y2 350 aa13.11□□□□□ -0.31
RNF40-208ENST00000565995 TMIEQ8NEW7 156 aa13.11□□□□□ -0.31
RNF40-208ENST00000565995 PRR11Q96HE9 360 aaPredicted RBP13.11□□□□□ -0.31
RNF40-208ENST00000565995 NAF1Q96HR8 494 aaKnown RBP13.11□□□□□ -0.31
RNF40-208ENST00000565995 DUSP23Q9BVJ7 150 aa13.11□□□□□ -0.31
RNF40-208ENST00000565995 POPDC2Q9HBU9 364 aa13.11□□□□□ -0.31
RNF40-208ENST00000565995 METTL14Q9HCE5 456 aaKnown RBP13.11□□□□□ -0.31
RNF40-208ENST00000565995 THSD1Q9NS62 852 aa13.11□□□□□ -0.31
RNF40-208ENST00000565995 CA5BQ9Y2D0 317 aa13.11□□□□□ -0.31
RNF40-208ENST00000565995 PCDHB4Q9Y5E5 795 aa13.11□□□□□ -0.31
RNF40-208ENST00000565995 TLN1Q9Y490 2541 aaKnown RBP13.1□□□□□ -0.31
RNF40-208ENST00000565995 CDRT15L2A8MXV6 281 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 K7ENP7 123 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 KLK10O43240 276 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 SLC2A3P11169 496 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 HNRNPA2B1P22626 353 aaKnown RBP13.1□□□□□ -0.31
RNF40-208ENST00000565995 BRD2P25440 801 aaKnown RBP13.1□□□□□ -0.31
RNF40-208ENST00000565995 PRCPP42785 496 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 FMO5P49326 533 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 YWHAZP63104 245 aaKnown RBP13.1□□□□□ -0.31
RNF40-208ENST00000565995 KCNC4Q03721 635 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 CCDC15Q0P6D6 951 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 LRMPQ12912 555 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 MTA1Q13330 715 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 LY6DQ14210 128 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 DCAF17Q5H9S7 520 aaPredicted RBP13.1□□□□□ -0.31
RNF40-208ENST00000565995 ANKRD40Q6AI12 368 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 INO80CQ6PI98 192 aaPredicted RBP13.1□□□□□ -0.31
RNF40-208ENST00000565995 TMC6Q7Z403 805 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 TMEM110Q86TL2 294 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 HORMAD1Q86X24 394 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 CHSY1Q86X52 802 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 SLC22A18ASQ8N1D0 253 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 OR13H1Q8NG92 308 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 CCDC97Q96F63 343 aaPredicted RBP13.1□□□□□ -0.31
RNF40-208ENST00000565995 VCPIP1Q96JH7 1222 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 NT5C1BQ96P26 610 aa13.1□□□□□ -0.31
RNF40-208ENST00000565995 EVA1BQ9NVM1 165 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms