RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 ANKS1BQ7Z6G8 1248 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 ZBTB33Q86T24 672 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 MIB1Q86YT6 1006 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 SLC44A2Q8IWA5 706 aaPredicted RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 SCUBE3Q8IX30 993 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 GPALPP1Q8IXQ4 340 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 DCP1BQ8IZD4 617 aaKnown RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 TAGAPQ8N103 731 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 LRRC71Q8N4P6 559 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 MFSD2AQ8NA29 543 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 TTC29Q8NA56 475 aaPredicted RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 PCSK9Q8NBP7 692 aaKnown RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 LEMD2Q8NC56 503 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 OR7G3Q8NG95 312 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 OR6F1Q8NGZ6 308 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 ZNF606Q8WXB4 792 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 GLG1Q92896 1179 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 FOXJ1Q92949 421 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 P2RX5Q93086 422 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 YIPF5Q969M3 257 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 PPWD1Q96BP3 646 aaKnown RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 TUBGCP3Q96CW5 907 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 LRRC39Q96DD0 335 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 DUS3LQ96G46 650 aaKnown RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 CNOT6LQ96LI5 555 aaKnown RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 TEKT5Q96M29 485 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 HS6ST2Q96MM7 605 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 SERPINB11Q96P15 392 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 TRIM56Q9BRZ2 755 aaKnown RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 TMEM120AQ9BXJ8 343 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 HEMGNQ9BXL5 484 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 PACSIN1Q9BY11 444 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 ADAMTS10Q9H324 1103 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 TRABDQ9H4I3 376 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 NOL6Q9H6R4 1146 aaKnown RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 EPS8L2Q9H6S3 715 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 GAREM1Q9H706 876 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 MANSC1Q9H8J5 431 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 NANOGQ9H9S0 305 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 CABP5Q9NP86 173 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 IFT46Q9NQC8 304 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 NECTIN3Q9NQS3 549 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 KLHL1Q9NR64 748 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 PCDHB16Q9NRJ7 776 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 SACM1LQ9NTJ5 587 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 PTTG3PQ9NZH4 202 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 MALT1Q9UDY8 824 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 PRKAG2Q9UGJ0 569 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 SRRDQ9UH36 339 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 EBF1Q9UH73 591 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 EVLQ9UI08 416 aaPredicted RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 RIMS3Q9UJD0 308 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 LAMP5Q9UJQ1 280 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 DNMT3LQ9UJW3 386 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 RAB23Q9ULC3 237 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 EDARQ9UNE0 448 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 DUSP12Q9UNI6 340 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 NAALADL1Q9UQQ1 740 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 NDUFAF1Q9Y375 327 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 NCANO14594 1321 aa6.4□□□□□ -1.39
PTPN9-204ENST00000564970 ZNF609O15014 1411 aa6.4□□□□□ -1.39
PTPN9-204ENST00000564970 MROH1Q8NDA8 1641 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 DDX60Q8IY21 1712 aaKnown RBP6.39□□□□□ -1.39
PTPN9-204ENST00000564970 KLF18A0A0U1RQI7 1052 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 PNMA8CA0A1B0GUJ8 204 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 HMX3A6NHT5 357 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 SLC9B1P1A6NJY1 282 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 A8MX80 341 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 H3BM21 787 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 H3BUI4 141 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 ERVH48-1M5A8F1 160 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 IFRD1O00458 451 aaPredicted RBP6.39□□□□□ -1.39
PTPN9-204ENST00000564970 PLOD2O00469 737 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 DNALI1O14645 258 aaPredicted RBP6.39□□□□□ -1.39
PTPN9-204ENST00000564970 ABCD4O14678 606 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 PPM1DO15297 605 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 TYROBPO43914 113 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 PLA2G6O60733 806 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 SEC14L2O76054 403 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 PDE9AO76083 593 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 KLHL18O94889 574 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 SOX30O94993 753 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 MFN2O95140 757 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 CSPG5O95196 566 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 DEXIO95424 95 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 LDOC1O95751 146 aaPredicted RBP6.39□□□□□ -1.39
PTPN9-204ENST00000564970 FGGP02679 453 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 HRGP04196 525 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 IFNA4P05014 189 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 H2AFZP0C0S5 128 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 CKBP12277 381 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 RAB4AP20338 218 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 CA4P22748 312 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 ITGA6P23229 1130 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 MYF6P23409 242 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 CDH5P33151 784 aaPredicted RBP6.39□□□□□ -1.39
PTPN9-204ENST00000564970 CPOXP36551 454 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 EIF2DP41214 584 aaKnown RBP6.39□□□□□ -1.39
PTPN9-204ENST00000564970 PRKCIP41743 596 aa6.39□□□□□ -1.39
PTPN9-204ENST00000564970 IL12RB1P42701 662 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms