RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 CIR1Q86X95 450 aaPredicted RBP19.97■□□□□ 0.79
CLN6-205ENST00000564846 ARHGEF2Q92974 986 aaKnown RBP19.97■□□□□ 0.79
CLN6-205ENST00000564846 ZFRQ96KR1 1074 aaKnown RBP19.97■□□□□ 0.79
CLN6-205ENST00000564846 GCNAQ96QF7 691 aa19.97■□□□□ 0.79
CLN6-205ENST00000564846 NAT9Q9BTE0 207 aa19.97■□□□□ 0.79
CLN6-205ENST00000564846 MLPHQ9BV36 600 aaPredicted RBP19.97■□□□□ 0.79
CLN6-205ENST00000564846 CNOT10Q9H9A5 744 aaKnown RBP19.97■□□□□ 0.79
CLN6-205ENST00000564846 LRRC40Q9H9A6 602 aa19.97■□□□□ 0.79
CLN6-205ENST00000564846 SP110Q9HB58 689 aa19.97■□□□□ 0.79
CLN6-205ENST00000564846 RBM22Q9NW64 420 aaKnown RBP eCLIP19.97■□□□□ 0.79
CLN6-205ENST00000564846 ZFP37Q9Y6Q3 630 aaPredicted RBP19.97■□□□□ 0.79
CLN6-205ENST00000564846 DOCK4Q8N1I0 1966 aa19.97■□□□□ 0.79
CLN6-205ENST00000564846 CLDN11O75508 207 aa19.96■□□□□ 0.79
CLN6-205ENST00000564846 ANXA9O76027 345 aa19.96■□□□□ 0.79
CLN6-205ENST00000564846 NEBLO76041 1014 aa19.96■□□□□ 0.79
CLN6-205ENST00000564846 PEX11BO96011 259 aa19.96■□□□□ 0.79
CLN6-205ENST00000564846 CLCN4P51793 760 aa19.96■□□□□ 0.79
CLN6-205ENST00000564846 SMAD3P84022 425 aaKnown RBP19.96■□□□□ 0.79
CLN6-205ENST00000564846 IL10RBQ08334 325 aa19.96■□□□□ 0.79
CLN6-205ENST00000564846 PPM1LQ5SGD2 360 aa19.96■□□□□ 0.79
CLN6-205ENST00000564846 TXNDC8Q6A555 127 aa19.96■□□□□ 0.79
CLN6-205ENST00000564846 CFAP52Q8N1V2 620 aa19.96■□□□□ 0.79
CLN6-205ENST00000564846 MPP5Q8N3R9 675 aa19.96■□□□□ 0.79
CLN6-205ENST00000564846 ARL14EPQ8N8R7 260 aaPredicted RBP19.96■□□□□ 0.79
CLN6-205ENST00000564846 MICAL1Q8TDZ2 1067 aa19.96■□□□□ 0.79
CLN6-205ENST00000564846 NSMCE1Q8WV22 266 aa19.96■□□□□ 0.79
CLN6-205ENST00000564846 CFAP36Q96G28 342 aa19.96■□□□□ 0.79
CLN6-205ENST00000564846 CYP2S1Q96SQ9 504 aa19.96■□□□□ 0.79
CLN6-205ENST00000564846 CAPS2Q9BXY5 557 aa19.96■□□□□ 0.79
CLN6-205ENST00000564846 GLOD4Q9HC38 313 aa19.96■□□□□ 0.79
CLN6-205ENST00000564846 PFKLP17858 780 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 SERINC3Q13530 473 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 TTC39BQ5VTQ0 682 aaPredicted RBP19.95■□□□□ 0.78
CLN6-205ENST00000564846 NAPEPLDQ6IQ20 393 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 EXOC3L1Q86VI1 746 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 GSDMBQ8TAX9 411 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 STAMBPL1Q96FJ0 436 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 PRICKLE1Q96MT3 831 aaPredicted RBP19.95■□□□□ 0.78
CLN6-205ENST00000564846 DHRS4Q9BTZ2 278 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 CASS4Q9NQ75 786 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 SMPD4Q9NXE4 827 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 PSMC3IPQ9P2W1 217 aaPredicted RBP19.95■□□□□ 0.78
CLN6-205ENST00000564846 TBK1Q9UHD2 729 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 PCDHA11Q9Y5I1 949 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 SHOX2O60902 331 aaPredicted RBP19.95■□□□□ 0.78
CLN6-205ENST00000564846 HLA-DQB2P05538 268 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 SPARCL1Q14515 664 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 MARC1Q5VT66 337 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 UNC5AQ6ZN44 842 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 CHST9Q7L1S5 443 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 OTOP3Q7RTS5 596 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 LINC00523Q86TU6 105 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 ZNF354CQ86Y25 554 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 HS6ST3Q8IZP7 471 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 OXNAD1Q96HP4 312 aaPredicted RBP19.95■□□□□ 0.78
CLN6-205ENST00000564846 ZNF419Q96HQ0 510 aaPredicted RBP19.95■□□□□ 0.78
CLN6-205ENST00000564846 SLC22A12Q96S37 553 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 MAGEH1Q9H213 219 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 ASAH2Q9NR71 780 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 ACTL7BQ9Y614 415 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 CPQQ9Y646 472 aa19.95■□□□□ 0.78
CLN6-205ENST00000564846 J3KR12 359 aa19.94■□□□□ 0.78
CLN6-205ENST00000564846 CSPG5O95196 566 aa19.94■□□□□ 0.78
CLN6-205ENST00000564846 MGAT1P26572 445 aa19.94■□□□□ 0.78
CLN6-205ENST00000564846 MSH2P43246 934 aa19.94■□□□□ 0.78
CLN6-205ENST00000564846 SESN2P58004 480 aaPredicted RBP19.94■□□□□ 0.78
CLN6-205ENST00000564846 CYP4F8P98187 520 aa19.94■□□□□ 0.78
CLN6-205ENST00000564846 TNK2Q07912 1038 aa19.94■□□□□ 0.78
CLN6-205ENST00000564846 TMED2Q15363 201 aa19.94■□□□□ 0.78
CLN6-205ENST00000564846 CYS1Q717R9 158 aa19.94■□□□□ 0.78
CLN6-205ENST00000564846 CYP4X1Q8N118 509 aa19.94■□□□□ 0.78
CLN6-205ENST00000564846 OR52K1Q8NGK4 314 aa19.94■□□□□ 0.78
CLN6-205ENST00000564846 SAMD11Q96NU1 681 aa19.94■□□□□ 0.78
CLN6-205ENST00000564846 PAFAH2Q99487 392 aa19.94■□□□□ 0.78
CLN6-205ENST00000564846 ATXN3LQ9H3M9 355 aa19.94■□□□□ 0.78
CLN6-205ENST00000564846 PLAC1Q9HBJ0 212 aa19.94■□□□□ 0.78
CLN6-205ENST00000564846 TTLL3Q9Y4R7 772 aa19.94■□□□□ 0.78
CLN6-205ENST00000564846 ANAPC1Q9H1A4 1944 aa19.94■□□□□ 0.78
CLN6-205ENST00000564846 NYNRINQ9P2P1 1898 aaKnown RBP19.93■□□□□ 0.78
CLN6-205ENST00000564846 A0A1B0GVM2 712 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 TCAF2A6NFQ2 919 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 H3BNC9 293 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 FGF19O95750 216 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 PRKCHP24723 683 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 MDH1P40925 334 aaKnown RBP19.93■□□□□ 0.78
CLN6-205ENST00000564846 GEMP55040 296 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 RPS24P62847 133 aaKnown RBP19.93■□□□□ 0.78
CLN6-205ENST00000564846 SLC7A9P82251 487 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 STEAP4Q687X5 459 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 PDE12Q6L8Q7 609 aaKnown RBP19.93■□□□□ 0.78
CLN6-205ENST00000564846 CASC4Q6P4E1 433 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 ADGRD1Q6QNK2 874 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 TEX26Q8N6G2 289 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 DNAAF3Q8N9W5 541 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 ARNTL2Q8WYA1 636 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 WBP2Q969T9 261 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 PABPC5Q96DU9 382 aaKnown RBP19.93■□□□□ 0.78
CLN6-205ENST00000564846 CORO1BQ9BR76 489 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 BFARQ9NZS9 450 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 MYO18AQ92614 2054 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms