RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 TMCO3Q6UWJ1 677 aa16.35■□□□□ 0.21
RAB40C-208ENST00000564703 ZNF366Q8N895 744 aa16.35■□□□□ 0.21
RAB40C-208ENST00000564703 KIAA1524Q8TCG1 905 aa16.35■□□□□ 0.21
RAB40C-208ENST00000564703 MRGPRX3Q96LB0 322 aa16.35■□□□□ 0.21
RAB40C-208ENST00000564703 PSMB7Q99436 277 aa16.35■□□□□ 0.21
RAB40C-208ENST00000564703 MAK16Q9BXY0 300 aaKnown RBP16.35■□□□□ 0.21
RAB40C-208ENST00000564703 TSGA10Q9BZW7 698 aa16.35■□□□□ 0.21
RAB40C-208ENST00000564703 LACRTQ9GZZ8 138 aa16.35■□□□□ 0.21
RAB40C-208ENST00000564703 FBRSQ9HAH7 460 aa16.35■□□□□ 0.21
RAB40C-208ENST00000564703 NDFIP2Q9NV92 336 aa16.35■□□□□ 0.21
RAB40C-208ENST00000564703 DDX56Q9NY93 547 aaKnown RBP16.35■□□□□ 0.21
RAB40C-208ENST00000564703 DUSP10Q9Y6W6 482 aa16.35■□□□□ 0.21
RAB40C-208ENST00000564703 RCCD1A6NED2 376 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 ZSCAN5CA6NGD5 496 aaPredicted RBP16.34■□□□□ 0.21
RAB40C-208ENST00000564703 TTC34A8MYJ7 566 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 RASA4BC9J798 803 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 RASA4O43374 803 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 KDELR3O43731 214 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 KRT86O43790 486 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 ACADMP11310 421 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 TDGF1P13385 188 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 ACVRL1P37023 503 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 RECQLP46063 649 aaPredicted RBP16.34■□□□□ 0.21
RAB40C-208ENST00000564703 STK19P49842 368 aaPredicted RBP16.34■□□□□ 0.21
RAB40C-208ENST00000564703 CAMK2GQ13555 558 aaPredicted RBP16.34■□□□□ 0.21
RAB40C-208ENST00000564703 DLG2Q15700 870 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 HNRNPA1L2Q32P51 320 aaKnown RBP16.34■□□□□ 0.21
RAB40C-208ENST00000564703 C11orf63Q6NUN7 778 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 RASSF3Q86WH2 238 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 CPNE8Q86YQ8 564 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 TMPRSS6Q8IU80 811 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 ZBTB44Q8NCP5 570 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 OR2T3Q8NH03 318 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 TPCN2Q8NHX9 752 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 PRCCQ92733 491 aaPredicted RBP16.34■□□□□ 0.21
RAB40C-208ENST00000564703 NELL1Q92832 810 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 CCDC114Q96M63 670 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 CSPG4P5Q96PW8 444 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 ACE2Q9BYF1 805 aaPredicted RBP16.34■□□□□ 0.21
RAB40C-208ENST00000564703 SEMA4AQ9H3S1 761 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 PRDM16Q9HAZ2 1276 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 PRSS16Q9NQE7 514 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 NEU3Q9UQ49 428 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 HYOU1Q9Y4L1 999 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 ADGRG1Q9Y653 693 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 NUP205Q92621 2012 aa16.34■□□□□ 0.21
RAB40C-208ENST00000564703 CXorf51AA0A1B0GTR3 108 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 MACROD2A1Z1Q3 448 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 LRRD1A4D1F6 860 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 MAP3K13O43283 966 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 ATP9BO43861 1147 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 BNIP3LO60238 219 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 ZNF217O75362 1048 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 CCDC175P0C221 793 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 GABRG2P18507 467 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 KDELR1P24390 212 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 SERPINB6P35237 376 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 CLCN6P51797 869 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 DMWDQ09019 674 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 SFSWAPQ12872 951 aaKnown RBP16.33■□□□□ 0.2
RAB40C-208ENST00000564703 DPYSQ14117 519 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 KIAA1324Q6UXG2 1013 aaKnown RBP16.33■□□□□ 0.2
RAB40C-208ENST00000564703 LINGO4Q6UY18 593 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 CEP68Q76N32 757 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 METTL3Q86U44 580 aaKnown RBP16.33■□□□□ 0.2
RAB40C-208ENST00000564703 SYCE1Q8N0S2 351 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 SH2D3CQ8N5H7 860 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 RNF10Q8N5U6 811 aaKnown RBP16.33■□□□□ 0.2
RAB40C-208ENST00000564703 MDGA1Q8NFP4 955 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 SIPA1Q96FS4 1042 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 MYO19Q96H55 970 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 CELF6Q96J87 481 aaKnown RBP16.33■□□□□ 0.2
RAB40C-208ENST00000564703 TPSD1Q9BZJ3 242 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 RAPGEFL1Q9UHV5 662 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 HS3ST2Q9Y278 367 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 R4GN57 208 aa16.33■□□□□ 0.2
RAB40C-208ENST00000564703 DFFAO00273 331 aa16.32■□□□□ 0.2
RAB40C-208ENST00000564703 RPP40O75818 363 aaKnown RBP16.32■□□□□ 0.2
RAB40C-208ENST00000564703 MT-CO1P00395 513 aa16.32■□□□□ 0.2
RAB40C-208ENST00000564703 GLDCP23378 1020 aa16.32■□□□□ 0.2
RAB40C-208ENST00000564703 DNA2P51530 1060 aa16.32■□□□□ 0.2
RAB40C-208ENST00000564703 MMRN1Q13201 1228 aa16.32■□□□□ 0.2
RAB40C-208ENST00000564703 SERINC3Q13530 473 aa16.32■□□□□ 0.2
RAB40C-208ENST00000564703 ANKRD20A8PQ5CZ79 823 aa16.32■□□□□ 0.2
RAB40C-208ENST00000564703 DSG4Q86SJ6 1040 aa16.32■□□□□ 0.2
RAB40C-208ENST00000564703 FAM71BQ8TC56 605 aa16.32■□□□□ 0.2
RAB40C-208ENST00000564703 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.32■□□□□ 0.2
RAB40C-208ENST00000564703 HMCESQ96FZ2 354 aa16.32■□□□□ 0.2
RAB40C-208ENST00000564703 SPACA7Q96KW9 195 aa16.32■□□□□ 0.2
RAB40C-208ENST00000564703 MRGPRX1Q96LB2 322 aa16.32■□□□□ 0.2
RAB40C-208ENST00000564703 ZNF670Q9BS34 389 aa16.32■□□□□ 0.2
RAB40C-208ENST00000564703 SLC39A8Q9C0K1 460 aa16.32■□□□□ 0.2
RAB40C-208ENST00000564703 MTG2Q9H4K7 406 aa16.32■□□□□ 0.2
RAB40C-208ENST00000564703 KLHL11Q9NVR0 708 aa16.32■□□□□ 0.2
RAB40C-208ENST00000564703 SALL4Q9UJQ4 1053 aa16.32■□□□□ 0.2
RAB40C-208ENST00000564703 RAB23Q9ULC3 237 aa16.32■□□□□ 0.2
RAB40C-208ENST00000564703 PSTPIP1O43586 416 aa16.31■□□□□ 0.2
RAB40C-208ENST00000564703 HRO43593 1189 aa16.31■□□□□ 0.2
RAB40C-208ENST00000564703 SIN3BO75182 1162 aa16.31■□□□□ 0.2
RAB40C-208ENST00000564703 ZMPSTE24O75844 475 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms