RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 TBL3Q12788 808 aaKnown RBP7.78□□□□□ -1.16
ATXN3-249ENST00000564606 CUL3Q13618 768 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 PDE1CQ14123 709 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-249ENST00000564606 PCLAFQ15004 111 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 FAM83EQ2M2I3 478 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 MAP7D1Q3KQU3 841 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 MMEL1Q495T6 779 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 XKR4Q5GH76 650 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 AGAP9Q5VTM2 703 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 IRAK1BP1Q5VVH5 260 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 TAF2Q6P1X5 1199 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 PRMT9Q6P2P2 845 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 PGM2L1Q6PCE3 622 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 EPGNQ6UW88 154 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 ALKAL1Q6UXT8 129 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 ZYG11AQ6WRX3 759 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 BNC2Q6ZN30 1099 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-249ENST00000564606 CPSF7Q8N684 471 aaKnown RBP7.78□□□□□ -1.16
ATXN3-249ENST00000564606 TDRD5Q8NAT2 981 aaKnown RBP7.78□□□□□ -1.16
ATXN3-249ENST00000564606 CEP70Q8NHQ1 597 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 LRRN4Q8WUT4 740 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 GATA6Q92908 595 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 POP5Q969H6 163 aaKnown RBP7.78□□□□□ -1.16
ATXN3-249ENST00000564606 ZNF669Q96BR6 464 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-249ENST00000564606 SLC10A4Q96EP9 437 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 SCYL1Q96KG9 808 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 FAM84AQ96KN4 292 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 TSGA13Q96PP4 275 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 MRPL1Q9BYD6 325 aaKnown RBP7.78□□□□□ -1.16
ATXN3-249ENST00000564606 YIPF3Q9GZM5 350 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 DRC3Q9H069 523 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 OSBPL2Q9H1P3 480 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 PRDM12Q9H4Q4 367 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 WDCPQ9H6R7 721 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 C10orf88Q9H8K7 445 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 C20orf96Q9NUD7 363 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-249ENST00000564606 TBC1D13Q9NVG8 400 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 GPATCH2LQ9NWQ4 482 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-249ENST00000564606 ARMCX1Q9P291 453 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 TJP2Q9UDY2 1190 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 CDH22Q9UJ99 828 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 CDH9Q9ULB4 789 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 Q9Y3F1 56 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 ASB3Q9Y575 518 aa7.78□□□□□ -1.16
ATXN3-249ENST00000564606 SMIM28A0A1B0GU29 152 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 AP1G1O43747 822 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 RECQL4O94761 1208 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 LTFP02788 710 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 ALDOAP04075 364 aaKnown RBP7.77□□□□□ -1.17
ATXN3-249ENST00000564606 LYNP07948 512 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 MMP3P08254 477 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 PIM1P11309 404 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-249ENST00000564606 FGFR1P11362 822 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 STMN1P16949 149 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 GM2AP17900 193 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 ME2P23368 584 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 PSMB4P28070 264 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 RAB27AP51159 221 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 DNAJB13P59910 316 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 STX1BP61266 288 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 RPL10AP62906 217 aaKnown RBP7.77□□□□□ -1.17
ATXN3-249ENST00000564606 FKBP1BP68106 108 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 ADIGQ0VDE8 80 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 TRAP1Q12931 704 aaKnown RBP7.77□□□□□ -1.17
ATXN3-249ENST00000564606 ORC1Q13415 861 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 DPYSQ14117 519 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 CNGA3Q16281 694 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 KCTD19Q17RG1 926 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-249ENST00000564606 SOWAHAQ2M3V2 549 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 RABGAP1LQ5R372 815 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 SH3PXD2AQ5TCZ1 1133 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 TAPT1Q6NXT6 567 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 RFWD3Q6PCD5 774 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 BLOC1S3Q6QNY0 202 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 RNF19BQ6ZMZ0 732 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 CDHR3Q6ZTQ4 885 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 ZNF534Q76KX8 674 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 EFL1Q7Z2Z2 1120 aaKnown RBP7.77□□□□□ -1.17
ATXN3-249ENST00000564606 LIMS2Q7Z4I7 341 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 RAB44Q7Z6P3 723 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-249ENST00000564606 GALNT7Q86SF2 657 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 PIGZQ86VD9 579 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 C10orf107Q8IVU9 208 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 TMEM192Q8IY95 271 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 PGAM4Q8N0Y7 254 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 ZNF567Q8N184 647 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 THEM5Q8N1Q8 247 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 DCLK2Q8N568 766 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 C12orf29Q8N999 325 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 GOLM1Q8NBJ4 401 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 PCYOX1LQ8NBM8 494 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 TRPM4Q8TD43 1214 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 DTX3LQ8TDB6 740 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 SLC2A14Q8TDB8 520 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 TRAPPC12Q8WVT3 735 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 PEX13Q92968 403 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 RNF34Q969K3 372 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 PBXIP1Q96AQ6 731 aa7.77□□□□□ -1.17
ATXN3-249ENST00000564606 SMARCD1Q96GM5 515 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms