RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 ADH1BP00325 375 aa18.7■□□□□ 0.58
E4F1-203ENST00000563643 C5AR1P21730 350 aa18.7■□□□□ 0.58
E4F1-203ENST00000563643 NUDT1P36639 197 aa18.7■□□□□ 0.58
E4F1-203ENST00000563643 NDST1P52848 882 aa18.7■□□□□ 0.58
E4F1-203ENST00000563643 KCNMA1Q12791 1236 aa18.7■□□□□ 0.58
E4F1-203ENST00000563643 ARID5BQ14865 1188 aa18.7■□□□□ 0.58
E4F1-203ENST00000563643 CBWD6Q4V339 395 aa18.7■□□□□ 0.58
E4F1-203ENST00000563643 CBWD3Q5JTY5 395 aa18.7■□□□□ 0.58
E4F1-203ENST00000563643 CBWD5Q5RIA9 395 aa18.7■□□□□ 0.58
E4F1-203ENST00000563643 RSRC2Q7L4I2 434 aaKnown RBP18.7■□□□□ 0.58
E4F1-203ENST00000563643 ZNF564Q8TBZ8 553 aaPredicted RBP18.7■□□□□ 0.58
E4F1-203ENST00000563643 SEMA4DQ92854 862 aa18.7■□□□□ 0.58
E4F1-203ENST00000563643 KLHDC7BQ96G42 594 aa18.7■□□□□ 0.58
E4F1-203ENST00000563643 FAXDC2Q96IV6 333 aa18.7■□□□□ 0.58
E4F1-203ENST00000563643 APOBEC3GQ9HC16 384 aaKnown RBP18.7■□□□□ 0.58
E4F1-203ENST00000563643 RAB20Q9NX57 234 aa18.7■□□□□ 0.58
E4F1-203ENST00000563643 ICE1Q9Y2F5 2266 aa18.69■□□□□ 0.58
E4F1-203ENST00000563643 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.69■□□□□ 0.58
E4F1-203ENST00000563643 K7ESM1 405 aa18.69■□□□□ 0.58
E4F1-203ENST00000563643 PMM2O15305 246 aa18.69■□□□□ 0.58
E4F1-203ENST00000563643 ERCC5P28715 1186 aaPredicted RBP18.69■□□□□ 0.58
E4F1-203ENST00000563643 SGSHP51688 502 aa18.69■□□□□ 0.58
E4F1-203ENST00000563643 ZNF177Q13360 481 aaPredicted RBP18.69■□□□□ 0.58
E4F1-203ENST00000563643 CLCA4Q14CN2 919 aa18.69■□□□□ 0.58
E4F1-203ENST00000563643 TRIP4Q15650 581 aaPredicted RBP18.69■□□□□ 0.58
E4F1-203ENST00000563643 POM121L1PQ3SYA9 428 aa18.69■□□□□ 0.58
E4F1-203ENST00000563643 CT47A1Q5JQC4 288 aaPredicted RBP18.69■□□□□ 0.58
E4F1-203ENST00000563643 TRIM59Q8IWR1 403 aa18.69■□□□□ 0.58
E4F1-203ENST00000563643 MRGPRX3Q96LB0 322 aa18.69■□□□□ 0.58
E4F1-203ENST00000563643 FAM129BQ96TA1 746 aa18.69■□□□□ 0.58
E4F1-203ENST00000563643 CYP3A43Q9HB55 503 aa18.69■□□□□ 0.58
E4F1-203ENST00000563643 PCDHGA4Q9Y5G9 962 aa18.69■□□□□ 0.58
E4F1-203ENST00000563643 USP3Q9Y6I4 520 aa18.69■□□□□ 0.58
E4F1-203ENST00000563643 C2CD3Q4AC94 2353 aa18.69■□□□□ 0.58
E4F1-203ENST00000563643 CCDC187A0A096LP49 1063 aa18.68■□□□□ 0.58
E4F1-203ENST00000563643 NEMP2A6NFY4 417 aa18.68■□□□□ 0.58
E4F1-203ENST00000563643 PRAMEF26H0Y7S4 382 aa18.68■□□□□ 0.58
E4F1-203ENST00000563643 SCAMP1O15126 338 aa18.68■□□□□ 0.58
E4F1-203ENST00000563643 TCEA3O75764 348 aa18.68■□□□□ 0.58
E4F1-203ENST00000563643 SLC5A2P31639 672 aa18.68■□□□□ 0.58
E4F1-203ENST00000563643 DRD3P35462 400 aa18.68■□□□□ 0.58
E4F1-203ENST00000563643 FMO5P49326 533 aa18.68■□□□□ 0.58
E4F1-203ENST00000563643 CDKN3Q16667 212 aa18.68■□□□□ 0.58
E4F1-203ENST00000563643 CCDC183Q5T5S1 534 aa18.68■□□□□ 0.58
E4F1-203ENST00000563643 GUSBP11Q6P575 273 aa18.68■□□□□ 0.58
E4F1-203ENST00000563643 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.68■□□□□ 0.58
E4F1-203ENST00000563643 C14orf80Q86SX3 495 aa18.68■□□□□ 0.58
E4F1-203ENST00000563643 UNC93AQ86WB7 457 aa18.68■□□□□ 0.58
E4F1-203ENST00000563643 TTC17Q96AE7 1141 aa18.68■□□□□ 0.58
E4F1-203ENST00000563643 LIN37Q96GY3 246 aaPredicted RBP18.68■□□□□ 0.58
E4F1-203ENST00000563643 DUSP23Q9BVJ7 150 aa18.68■□□□□ 0.58
E4F1-203ENST00000563643 PLEKHB1Q9UF11 243 aaPredicted RBP18.68■□□□□ 0.58
E4F1-203ENST00000563643 STOML2Q9UJZ1 356 aa18.68■□□□□ 0.58
E4F1-203ENST00000563643 PCDHGA7Q9Y5G6 932 aa18.68■□□□□ 0.58
E4F1-203ENST00000563643 TARSL2A2RTX5 802 aaKnown RBP18.67■□□□□ 0.58
E4F1-203ENST00000563643 CPED1A4D0V7 1026 aa18.67■□□□□ 0.58
E4F1-203ENST00000563643 TTC34A8MYJ7 566 aa18.67■□□□□ 0.58
E4F1-203ENST00000563643 NEBLO76041 1014 aa18.67■□□□□ 0.58
E4F1-203ENST00000563643 IL1BP01584 269 aa18.67■□□□□ 0.58
E4F1-203ENST00000563643 ASLP04424 464 aa18.67■□□□□ 0.58
E4F1-203ENST00000563643 CASRP41180 1078 aa18.67■□□□□ 0.58
E4F1-203ENST00000563643 CSKP41240 450 aa18.67■□□□□ 0.58
E4F1-203ENST00000563643 PDX1P52945 283 aa18.67■□□□□ 0.58
E4F1-203ENST00000563643 INCA1Q0VD86 236 aa18.67■□□□□ 0.58
E4F1-203ENST00000563643 SETMARQ53H47 684 aaPredicted RBP18.67■□□□□ 0.58
E4F1-203ENST00000563643 ADGRF1Q5T601 910 aa18.67■□□□□ 0.58
E4F1-203ENST00000563643 CRTC1Q6UUV9 634 aa18.67■□□□□ 0.58
E4F1-203ENST00000563643 EFL1Q7Z2Z2 1120 aaKnown RBP18.67■□□□□ 0.58
E4F1-203ENST00000563643 TRIM69Q86WT6 500 aa18.67■□□□□ 0.58
E4F1-203ENST00000563643 KDM1BQ8NB78 822 aa18.67■□□□□ 0.58
E4F1-203ENST00000563643 TPCN2Q8NHX9 752 aa18.67■□□□□ 0.58
E4F1-203ENST00000563643 KDM4CQ9H3R0 1056 aa18.67■□□□□ 0.58
E4F1-203ENST00000563643 EDDM13A0A1B0GTR0 161 aa18.66■□□□□ 0.58
E4F1-203ENST00000563643 P4HA2O15460 535 aa18.66■□□□□ 0.58
E4F1-203ENST00000563643 RTN2O75298 545 aa18.66■□□□□ 0.58
E4F1-203ENST00000563643 MZF1P28698 734 aaPredicted RBP18.66■□□□□ 0.58
E4F1-203ENST00000563643 CYP4F2P78329 520 aa18.66■□□□□ 0.58
E4F1-203ENST00000563643 ZCCHC8Q6NZY4 707 aaKnown RBP18.66■□□□□ 0.58
E4F1-203ENST00000563643 STK40Q8N2I9 435 aa18.66■□□□□ 0.58
E4F1-203ENST00000563643 TMEM145Q8NBT3 493 aa18.66■□□□□ 0.58
E4F1-203ENST00000563643 FAM131CQ96AQ9 280 aa18.66■□□□□ 0.58
E4F1-203ENST00000563643 CYFIP2Q96F07 1278 aa18.66■□□□□ 0.58
E4F1-203ENST00000563643 FUCA2Q9BTY2 467 aa18.66■□□□□ 0.58
E4F1-203ENST00000563643 ACSL6Q9UKU0 697 aa18.66■□□□□ 0.58
E4F1-203ENST00000563643 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.66■□□□□ 0.58
E4F1-203ENST00000563643 KIF26BQ2KJY2 2108 aa18.65■□□□□ 0.58
E4F1-203ENST00000563643 PLRG1O43660 514 aaKnown RBP18.65■□□□□ 0.58
E4F1-203ENST00000563643 TRIM21P19474 475 aaKnown RBP18.65■□□□□ 0.58
E4F1-203ENST00000563643 METAP1P53582 386 aa18.65■□□□□ 0.58
E4F1-203ENST00000563643 RIPPLY3P57055 190 aa18.65■□□□□ 0.58
E4F1-203ENST00000563643 CETN1Q12798 172 aa18.65■□□□□ 0.58
E4F1-203ENST00000563643 NCAPHQ15003 741 aa18.65■□□□□ 0.58
E4F1-203ENST00000563643 TPD52L1Q16890 204 aaPredicted RBP18.65■□□□□ 0.58
E4F1-203ENST00000563643 MPP7Q5T2T1 576 aa18.65■□□□□ 0.58
E4F1-203ENST00000563643 JAMLQ86YT9 394 aa18.65■□□□□ 0.58
E4F1-203ENST00000563643 IRF2BP1Q8IU81 584 aa18.65■□□□□ 0.58
E4F1-203ENST00000563643 ARHGAP18Q8N392 663 aa18.65■□□□□ 0.58
E4F1-203ENST00000563643 TTC39CQ8N584 583 aa18.65■□□□□ 0.58
E4F1-203ENST00000563643 ZSCAN1Q8NBB4 408 aa18.65■□□□□ 0.58
E4F1-203ENST00000563643 HTR3CQ8WXA8 447 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms