RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 CD44P16070 742 aaKnown RBP19.19■□□□□ 0.66
NME3-204ENST00000563498 KCNH2Q12809 1159 aa19.19■□□□□ 0.66
NME3-204ENST00000563498 PDCLQ13371 301 aa19.19■□□□□ 0.66
NME3-204ENST00000563498 TAF5Q15542 800 aa19.19■□□□□ 0.66
NME3-204ENST00000563498 DLG2Q15700 870 aa19.19■□□□□ 0.66
NME3-204ENST00000563498 TBC1D25Q3MII6 688 aa19.19■□□□□ 0.66
NME3-204ENST00000563498 TRIM59Q8IWR1 403 aa19.19■□□□□ 0.66
NME3-204ENST00000563498 ELOA2Q8IYF1 753 aaPredicted RBP19.19■□□□□ 0.66
NME3-204ENST00000563498 RPRD1AQ96P16 312 aaPredicted RBP19.19■□□□□ 0.66
NME3-204ENST00000563498 SLC2A13Q96QE2 648 aa19.19■□□□□ 0.66
NME3-204ENST00000563498 INTS2Q9H0H0 1204 aaKnown RBP19.19■□□□□ 0.66
NME3-204ENST00000563498 ASNSD1Q9NWL6 643 aa19.19■□□□□ 0.66
NME3-204ENST00000563498 DDIT4Q9NX09 232 aa19.19■□□□□ 0.66
NME3-204ENST00000563498 OR51B4Q9Y5P0 310 aa19.19■□□□□ 0.66
NME3-204ENST00000563498 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.18■□□□□ 0.66
NME3-204ENST00000563498 BICDL2A1A5D9 508 aa19.18■□□□□ 0.66
NME3-204ENST00000563498 SDC3O75056 442 aa19.18■□□□□ 0.66
NME3-204ENST00000563498 AFPP02771 609 aaKnown RBP19.18■□□□□ 0.66
NME3-204ENST00000563498 ZNF18P17022 549 aa19.18■□□□□ 0.66
NME3-204ENST00000563498 GNA15P30679 374 aa19.18■□□□□ 0.66
NME3-204ENST00000563498 NUMBP49757 651 aa19.18■□□□□ 0.66
NME3-204ENST00000563498 MARSP56192 900 aaKnown RBP19.18■□□□□ 0.66
NME3-204ENST00000563498 TAS2R38P59533 333 aa19.18■□□□□ 0.66
NME3-204ENST00000563498 CENPCQ03188 943 aa19.18■□□□□ 0.66
NME3-204ENST00000563498 TLE3Q04726 772 aa19.18■□□□□ 0.66
NME3-204ENST00000563498 CCDC15Q0P6D6 951 aa19.18■□□□□ 0.66
NME3-204ENST00000563498 ZNF177Q13360 481 aaPredicted RBP19.18■□□□□ 0.66
NME3-204ENST00000563498 AUHQ13825 339 aaKnown RBP19.18■□□□□ 0.66
NME3-204ENST00000563498 Q6ZVU0 165 aa19.18■□□□□ 0.66
NME3-204ENST00000563498 ENOSF1Q7L5Y1 443 aa19.18■□□□□ 0.66
NME3-204ENST00000563498 GPR155Q7Z3F1 870 aa19.18■□□□□ 0.66
NME3-204ENST00000563498 ERICH1Q86X53 443 aa19.18■□□□□ 0.66
NME3-204ENST00000563498 SH2D3CQ8N5H7 860 aa19.18■□□□□ 0.66
NME3-204ENST00000563498 OR4C6Q8NH72 309 aa19.18■□□□□ 0.66
NME3-204ENST00000563498 RNF34Q969K3 372 aa19.18■□□□□ 0.66
NME3-204ENST00000563498 KLHL11Q9NVR0 708 aa19.18■□□□□ 0.66
NME3-204ENST00000563498 VPS28Q9UK41 221 aa19.18■□□□□ 0.66
NME3-204ENST00000563498 HS3ST2Q9Y278 367 aa19.18■□□□□ 0.66
NME3-204ENST00000563498 TBC1D30Q9Y2I9 924 aa19.18■□□□□ 0.66
NME3-204ENST00000563498 SETXQ7Z333 2677 aaKnown RBP19.17■□□□□ 0.66
NME3-204ENST00000563498 THAP12O43422 761 aa19.17■□□□□ 0.66
NME3-204ENST00000563498 HSF2BPO75031 334 aa19.17■□□□□ 0.66
NME3-204ENST00000563498 CLDN11O75508 207 aa19.17■□□□□ 0.66
NME3-204ENST00000563498 MT-CO3P00414 261 aa19.17■□□□□ 0.66
NME3-204ENST00000563498 THEGLP0DJG4 465 aa19.17■□□□□ 0.66
NME3-204ENST00000563498 DGKAP23743 735 aa19.17■□□□□ 0.66
NME3-204ENST00000563498 KCNMA1Q12791 1236 aa19.17■□□□□ 0.66
NME3-204ENST00000563498 C5orf22Q49AR2 442 aa19.17■□□□□ 0.66
NME3-204ENST00000563498 HS1BP3Q53T59 392 aa19.17■□□□□ 0.66
NME3-204ENST00000563498 EFHC1Q5JVL4 640 aa19.17■□□□□ 0.66
NME3-204ENST00000563498 PIP5KL1Q5T9C9 394 aa19.17■□□□□ 0.66
NME3-204ENST00000563498 DEFB106AQ8N104 65 aa19.17■□□□□ 0.66
NME3-204ENST00000563498 OR52K2Q8NGK3 314 aa19.17■□□□□ 0.66
NME3-204ENST00000563498 UBE2TQ9NPD8 197 aaPredicted RBP19.17■□□□□ 0.66
NME3-204ENST00000563498 MAN1B1Q9UKM7 699 aa19.17■□□□□ 0.66
NME3-204ENST00000563498 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.17■□□□□ 0.66
NME3-204ENST00000563498 CKMT1AP12532 417 aa19.16■□□□□ 0.66
NME3-204ENST00000563498 DAB2P98082 770 aa19.16■□□□□ 0.66
NME3-204ENST00000563498 POM121L1PQ3SYA9 428 aa19.16■□□□□ 0.66
NME3-204ENST00000563498 ISM2Q6H9L7 571 aa19.16■□□□□ 0.66
NME3-204ENST00000563498 KLHL10Q6JEL2 608 aa19.16■□□□□ 0.66
NME3-204ENST00000563498 SPACA3Q8IXA5 215 aa19.16■□□□□ 0.66
NME3-204ENST00000563498 NELFBQ8WX92 580 aa19.16■□□□□ 0.66
NME3-204ENST00000563498 FAM81BQ96LP2 452 aa19.16■□□□□ 0.66
NME3-204ENST00000563498 CCDC114Q96M63 670 aa19.16■□□□□ 0.66
NME3-204ENST00000563498 VANGL2Q9ULK5 521 aa19.16■□□□□ 0.66
NME3-204ENST00000563498 CA5BQ9Y2D0 317 aa19.16■□□□□ 0.66
NME3-204ENST00000563498 FARP1Q9Y4F1 1045 aaPredicted RBP19.16■□□□□ 0.66
NME3-204ENST00000563498 HS3ST4Q9Y661 456 aa19.16■□□□□ 0.66
NME3-204ENST00000563498 SYNJ2BP-COX16A0A087WUM0 186 aa19.15■□□□□ 0.66
NME3-204ENST00000563498 A0A1W2PQU0 124 aa19.15■□□□□ 0.66
NME3-204ENST00000563498 PPP1R3GB7ZBB8 358 aa19.15■□□□□ 0.66
NME3-204ENST00000563498 IRAK1P51617 712 aa19.15■□□□□ 0.66
NME3-204ENST00000563498 CDH4P55283 916 aa19.15■□□□□ 0.66
NME3-204ENST00000563498 ZNF284Q2VY69 593 aa19.15■□□□□ 0.66
NME3-204ENST00000563498 CDCP2Q5VXM1 449 aa19.15■□□□□ 0.66
NME3-204ENST00000563498 SMYD5Q6GMV2 418 aa19.15■□□□□ 0.66
NME3-204ENST00000563498 KDM7AQ6ZMT4 941 aa19.15■□□□□ 0.66
NME3-204ENST00000563498 HORMAD1Q86X24 394 aa19.15■□□□□ 0.66
NME3-204ENST00000563498 ZNF248Q8NDW4 579 aa19.15■□□□□ 0.66
NME3-204ENST00000563498 TMIEQ8NEW7 156 aa19.15■□□□□ 0.66
NME3-204ENST00000563498 FAM174AQ8TBP5 190 aa19.15■□□□□ 0.66
NME3-204ENST00000563498 IFT43Q96FT9 208 aa19.15■□□□□ 0.66
NME3-204ENST00000563498 PPP1R13BQ96KQ4 1090 aa19.15■□□□□ 0.66
NME3-204ENST00000563498 ZNF578Q96N58 590 aaPredicted RBP19.15■□□□□ 0.66
NME3-204ENST00000563498 ACP6Q9NPH0 428 aa19.15■□□□□ 0.66
NME3-204ENST00000563498 COX16Q9P0S2 106 aa19.15■□□□□ 0.66
NME3-204ENST00000563498 SLC31A1O15431 190 aa19.14■□□□□ 0.65
NME3-204ENST00000563498 PAGE1O75459 146 aa19.14■□□□□ 0.65
NME3-204ENST00000563498 PIAS2O75928 621 aa19.14■□□□□ 0.65
NME3-204ENST00000563498 GP1BAP07359 652 aa19.14■□□□□ 0.65
NME3-204ENST00000563498 CTSLP07711 333 aa19.14■□□□□ 0.65
NME3-204ENST00000563498 GIMD1P0DJR0 217 aa19.14■□□□□ 0.65
NME3-204ENST00000563498 SRCP12931 536 aa19.14■□□□□ 0.65
NME3-204ENST00000563498 PRLRP16471 622 aa19.14■□□□□ 0.65
NME3-204ENST00000563498 BMP6P22004 513 aa19.14■□□□□ 0.65
NME3-204ENST00000563498 HNRNPA2B1P22626 353 aaKnown RBP19.14■□□□□ 0.65
NME3-204ENST00000563498 AKT2P31751 481 aa19.14■□□□□ 0.65
NME3-204ENST00000563498 CHRNA3P32297 505 aa19.14■□□□□ 0.65
NME3-204ENST00000563498 KRT83P78385 493 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms