RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 HTATIP2Q9BUP3 242 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 RBM4Q9BWF3 364 aaKnown RBP4.9□□□□□ -1.63
SMG1-207ENST00000563235 ZDHHC5Q9C0B5 715 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 ATP13A3Q9H7F0 1226 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 C17orf75Q9HAS0 396 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 AGPAT5Q9NUQ2 364 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 NUDT15Q9NV35 164 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 AJAP1Q9UKB5 411 aaPredicted RBP4.9□□□□□ -1.63
SMG1-207ENST00000563235 CHKBQ9Y259 395 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 SLC22A14Q9Y267 594 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 DNAJC16Q9Y2G8 782 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 FNDC3AQ9Y2H6 1198 aaKnown RBP4.9□□□□□ -1.63
SMG1-207ENST00000563235 SPACA6W5XKT8 324 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 MYO1CO00159 1063 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 STX16O14662 325 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 FOXP2O15409 715 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 DTNBO60941 627 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 MFN2O95140 757 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 NR3C2P08235 984 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 TIMP2P16035 220 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 HNRNPA2B1P22626 353 aaKnown RBP4.9□□□□□ -1.63
SMG1-207ENST00000563235 ADRA1DP25100 572 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 GRK4P32298 578 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 BMXP51813 675 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 ACTR2P61160 394 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 GAD2Q05329 585 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 SGCAQ16586 387 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 INSCQ1MX18 579 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 KRT24Q2M2I5 525 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 CCDC157Q569K6 752 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 NDUFAF5Q5TEU4 345 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 TTC23LQ6PF05 361 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 FOXR2Q6PJQ5 311 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 OVCH1Q7RTY7 1134 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 ADAT2Q7Z6V5 191 aaKnown RBP4.9□□□□□ -1.63
SMG1-207ENST00000563235 SYCE1Q8N0S2 351 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 MB21D1Q8N884 522 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 CPT1CQ8TCG5 803 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 TRPC4APQ8TEL6 797 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 RAB24Q969Q5 203 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 PPP1R36Q96LQ0 422 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 SYT17Q9BSW7 474 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 HEMGNQ9BXL5 484 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 TTYH3Q9C0H2 523 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 RAD21L1Q9H4I0 556 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 PRDM12Q9H4Q4 367 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 FAM212BQ9NTI7 297 aaPredicted RBP4.9□□□□□ -1.63
SMG1-207ENST00000563235 RAB20Q9NX57 234 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 PTRH2Q9Y3E5 179 aaKnown RBP4.9□□□□□ -1.63
SMG1-207ENST00000563235 ZHX2Q9Y6X8 837 aa4.9□□□□□ -1.63
SMG1-207ENST00000563235 KIF7Q2M1P5 1343 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 MAPK8IP3Q9UPT6 1336 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 ARHGAP23Q9P227 1491 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 A0A087WZ62 844 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 A0A1W2PN81 502 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 ARVCFO00192 962 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 SMAD9O15198 467 aaKnown RBP4.89□□□□□ -1.63
SMG1-207ENST00000563235 PEX1O43933 1283 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 PLXNC1O60486 1568 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 ZNF821O75541 412 aaPredicted RBP4.89□□□□□ -1.63
SMG1-207ENST00000563235 ACTL6BO94805 426 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 ITGBL1O95965 494 aaPredicted RBP4.89□□□□□ -1.63
SMG1-207ENST00000563235 KLKB1P03952 638 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 ANXA1P04083 346 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 NPR1P16066 1061 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 ZFXP17010 805 aaPredicted RBP4.89□□□□□ -1.63
SMG1-207ENST00000563235 ITPKAP23677 461 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 ABCC1P33527 1531 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 CHRNA7P36544 502 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 ZNF143P52747 638 aaPredicted RBP4.89□□□□□ -1.63
SMG1-207ENST00000563235 GPX6P59796 221 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 HSPA14Q0VDF9 509 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 KANK1Q14678 1352 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 DIP2AQ14689 1571 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 PON2Q15165 354 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 NONOQ15233 471 aaKnown RBP eCLIP4.89□□□□□ -1.63
SMG1-207ENST00000563235 BAK1Q16611 211 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 PRICKLE4Q2TBC4 344 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 RTP2Q5QGT7 225 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 ETFRF1Q6IPR1 90 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 PSAPL1Q6NUJ1 521 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 GALNT18Q6P9A2 607 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 CES3Q6UWW8 571 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 KANSL1Q7Z3B3 1105 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 SLC51AQ86UW1 340 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 PCDH19Q8TAB3 1148 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 ZNF384Q8TF68 577 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 UBLCP1Q8WVY7 318 aaPredicted RBP4.89□□□□□ -1.63
SMG1-207ENST00000563235 CFHR4Q92496 578 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 PHF21BQ96EK2 531 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 CFAP57Q96MR6 1250 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 TUBGCP5Q96RT8 1024 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 MMP19Q99542 508 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 JPH2Q9BR39 696 aaPredicted RBP4.89□□□□□ -1.63
SMG1-207ENST00000563235 FDXACB1Q9BRP7 624 aaPredicted RBP4.89□□□□□ -1.63
SMG1-207ENST00000563235 TMEM117Q9H0C3 514 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 ADAM7Q9H2U9 754 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 RIBC2Q9H4K1 309 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 CYP3A43Q9HB55 503 aa4.89□□□□□ -1.63
SMG1-207ENST00000563235 RXFP1Q9HBX9 757 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms