RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 F5P12259 2224 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 TECTAO75443 2155 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 ZSCAN5CA6NGD5 496 aaPredicted RBP19.24■□□□□ 0.67
RAB40C-207ENST00000563109 ENC1O14682 589 aa19.24■□□□□ 0.67
RAB40C-207ENST00000563109 TJP3O95049 919 aa19.24■□□□□ 0.67
RAB40C-207ENST00000563109 SRPRAP08240 638 aaKnown RBP19.24■□□□□ 0.67
RAB40C-207ENST00000563109 HNRNPLP14866 589 aaKnown RBP eCLIP19.24■□□□□ 0.67
RAB40C-207ENST00000563109 AOC1P19801 751 aa19.24■□□□□ 0.67
RAB40C-207ENST00000563109 MX2P20592 715 aa19.24■□□□□ 0.67
RAB40C-207ENST00000563109 KIR2DL1P43626 348 aaPredicted RBP19.24■□□□□ 0.67
RAB40C-207ENST00000563109 RPS9P46781 194 aaKnown RBP19.24■□□□□ 0.67
RAB40C-207ENST00000563109 PAPOLAP51003 745 aaKnown RBP19.24■□□□□ 0.67
RAB40C-207ENST00000563109 CLCN5P51795 746 aa19.24■□□□□ 0.67
RAB40C-207ENST00000563109 SERINC3Q13530 473 aa19.24■□□□□ 0.67
RAB40C-207ENST00000563109 DCAF12L1Q5VU92 463 aa19.24■□□□□ 0.67
RAB40C-207ENST00000563109 SDE2Q6IQ49 451 aa19.24■□□□□ 0.67
RAB40C-207ENST00000563109 BZW1Q7L1Q6 419 aaKnown RBP19.24■□□□□ 0.67
RAB40C-207ENST00000563109 CHPFQ8IZ52 775 aa19.24■□□□□ 0.67
RAB40C-207ENST00000563109 PLD5Q8N7P1 536 aa19.24■□□□□ 0.67
RAB40C-207ENST00000563109 RPLP0P6Q8NHW5 317 aa19.24■□□□□ 0.67
RAB40C-207ENST00000563109 USP33Q8TEY7 942 aa19.24■□□□□ 0.67
RAB40C-207ENST00000563109 CLDN23Q96B33 292 aa19.24■□□□□ 0.67
RAB40C-207ENST00000563109 IER2Q9BTL4 223 aa19.24■□□□□ 0.67
RAB40C-207ENST00000563109 HEMGNQ9BXL5 484 aa19.24■□□□□ 0.67
RAB40C-207ENST00000563109 THAP10Q9P2Z0 257 aaPredicted RBP19.24■□□□□ 0.67
RAB40C-207ENST00000563109 ERVW-1Q9UQF0 538 aa19.24■□□□□ 0.67
RAB40C-207ENST00000563109 HEY1Q9Y5J3 304 aa19.24■□□□□ 0.67
RAB40C-207ENST00000563109 RAD54BQ9Y620 910 aa19.24■□□□□ 0.67
RAB40C-207ENST00000563109 KDELR3O43731 214 aa19.23■□□□□ 0.67
RAB40C-207ENST00000563109 SNAP91O60641 907 aa19.23■□□□□ 0.67
RAB40C-207ENST00000563109 ATG13O75143 517 aa19.23■□□□□ 0.67
RAB40C-207ENST00000563109 DCNP07585 359 aaKnown RBP19.23■□□□□ 0.67
RAB40C-207ENST00000563109 CTSOP43234 321 aaPredicted RBP19.23■□□□□ 0.67
RAB40C-207ENST00000563109 GBE1Q04446 702 aa19.23■□□□□ 0.67
RAB40C-207ENST00000563109 ZNF234Q14588 700 aa19.23■□□□□ 0.67
RAB40C-207ENST00000563109 SERPINA13PQ6UXR4 307 aa19.23■□□□□ 0.67
RAB40C-207ENST00000563109 BBS12Q6ZW61 710 aa19.23■□□□□ 0.67
RAB40C-207ENST00000563109 LRRC49Q8IUZ0 686 aa19.23■□□□□ 0.67
RAB40C-207ENST00000563109 NUP205Q92621 2012 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 CXorf51AA0A1B0GTR3 108 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 PPP1R12AO14974 1030 aaPredicted RBP19.22■□□□□ 0.67
RAB40C-207ENST00000563109 KLF8O95600 359 aaPredicted RBP19.22■□□□□ 0.67
RAB40C-207ENST00000563109 ATP1A1P05023 1023 aaKnown RBP19.22■□□□□ 0.67
RAB40C-207ENST00000563109 GLDCP23378 1020 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 NTSR1P30989 418 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 NR2C2P49116 596 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 SLC20A2Q08357 652 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 GALNT2Q10471 571 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 EOGTQ5NDL2 527 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 EMC10Q5UCC4 262 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 AADACL2Q6P093 401 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 Q6ZS52 159 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 BMP8AQ7Z5Y6 402 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 METTL3Q86U44 580 aaKnown RBP19.22■□□□□ 0.67
RAB40C-207ENST00000563109 FBXL6Q8N531 539 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 ALLCQ8N6M5 410 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 ATP11CQ8NB49 1132 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 KDM1BQ8NB78 822 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 NETO2Q8NC67 525 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 P3H4Q92791 437 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 NAPGQ99747 312 aaPredicted RBP19.22■□□□□ 0.67
RAB40C-207ENST00000563109 CHRDQ9H2X0 955 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 DTLQ9NZJ0 730 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 IPO11Q9UI26 975 aaKnown RBP19.22■□□□□ 0.67
RAB40C-207ENST00000563109 BDP1A6H8Y1 2624 aa19.22■□□□□ 0.67
RAB40C-207ENST00000563109 CTAGE9A4FU28 777 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 CHURC1-FNTBB4DL54 471 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 ZMPSTE24O75844 475 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 STK19P49842 368 aaPredicted RBP19.21■□□□□ 0.67
RAB40C-207ENST00000563109 SERPINH1P50454 418 aaKnown RBP19.21■□□□□ 0.67
RAB40C-207ENST00000563109 VASPP50552 380 aaPredicted RBP19.21■□□□□ 0.67
RAB40C-207ENST00000563109 CLCN6P51797 869 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 ARF5P84085 180 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 IL10RBQ08334 325 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 FZD5Q13467 585 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 PDK1Q15118 436 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 PTPRNQ16849 979 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 LINGO4Q6UY18 593 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 IL17RCQ8NAC3 791 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 TXNDC5Q8NBS9 432 aaKnown RBP19.21■□□□□ 0.67
RAB40C-207ENST00000563109 NSMCE1Q8WV22 266 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 CASKIN2Q8WXE0 1202 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 HAUS1Q96CS2 278 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 PBKQ96KB5 322 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 RPL10LQ96L21 214 aaKnown RBP19.21■□□□□ 0.67
RAB40C-207ENST00000563109 WDR24Q96S15 920 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 ZDHHC4Q9NPG8 344 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 CACNA2D2Q9NY47 1150 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.21■□□□□ 0.67
RAB40C-207ENST00000563109 UBA2Q9UBT2 640 aaPredicted RBP19.21■□□□□ 0.67
RAB40C-207ENST00000563109 HS3ST2Q9Y278 367 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 STON1Q9Y6Q2 735 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 SHROOM3Q8TF72 1996 aa19.21■□□□□ 0.67
RAB40C-207ENST00000563109 FAM86C2PA6NEL3 165 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 APOC4-APOC2K7ER74 178 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 CEP104O60308 925 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 PRAMEF11O60813 436 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 MAP3K6O95382 1288 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 APOC2P02655 101 aa19.2■□□□□ 0.66
RAB40C-207ENST00000563109 CXCR5P32302 372 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms