RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 IQCHQ86VS3 1027 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 TRIM69Q86WT6 500 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 C1orf131Q8NDD1 294 aaKnown RBP13.34□□□□□ -0.27
SF3B3-202ENST00000562722 CCDC114Q96M63 670 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 DYRK4Q9NR20 520 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 ASNSD1Q9NWL6 643 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 PPM1HQ9ULR3 514 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 CA5BQ9Y2D0 317 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 HS3ST4Q9Y661 456 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 GOLGA4Q13439 2230 aaKnown RBP13.33□□□□□ -0.27
SF3B3-202ENST00000562722 ITPR1Q14643 2758 aa13.33□□□□□ -0.27
SF3B3-202ENST00000562722 TP53BP1Q12888 1972 aaPredicted RBP13.33□□□□□ -0.28
SF3B3-202ENST00000562722 BECN2A8MW95 431 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 C10orf142B7Z368 130 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 M0QYT0 321 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 KPNA3O00505 521 aaPredicted RBP13.33□□□□□ -0.28
SF3B3-202ENST00000562722 MCF2LO15068 1137 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 ALOX15BO15296 676 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 SLC31A1O15431 190 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 RRP8O43159 456 aaKnown RBP13.33□□□□□ -0.28
SF3B3-202ENST00000562722 RNGTTO60942 597 aaKnown RBP13.33□□□□□ -0.28
SF3B3-202ENST00000562722 PAGE1O75459 146 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 CLDN11O75508 207 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 RHOCP08134 193 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 PRLRP16471 622 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 KRT9P35527 623 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 KRT83P78385 493 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 DAB2P98082 770 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 APBA1Q02410 837 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 PTK2Q05397 1052 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 OVGP1Q12889 678 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 ILKQ13418 452 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 EIF4EBP2Q13542 120 aaPredicted RBP13.33□□□□□ -0.28
SF3B3-202ENST00000562722 SFMBT2Q5VUG0 894 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 FBXL19Q6PCT2 694 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 WDTC1Q8N5D0 677 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 SH2D3CQ8N5H7 860 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 ATP11CQ8NB49 1132 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 OR52K2Q8NGK3 314 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 TSC1Q92574 1164 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 KLK6Q92876 244 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 KLHDC7BQ96G42 594 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 BBC3Q96PG8 261 aaPredicted RBP13.33□□□□□ -0.28
SF3B3-202ENST00000562722 C2orf49Q9BVC5 232 aaPredicted RBP13.33□□□□□ -0.28
SF3B3-202ENST00000562722 PDCL3Q9H2J4 239 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 PREBQ9HCU5 417 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 ARHGAP20Q9P2F6 1191 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 APEX2Q9UBZ4 518 aa13.33□□□□□ -0.28
SF3B3-202ENST00000562722 NYNRINQ9P2P1 1898 aaKnown RBP13.32□□□□□ -0.28
SF3B3-202ENST00000562722 A0A1W2PQU0 124 aa13.32□□□□□ -0.28
SF3B3-202ENST00000562722 DAB1O75553 588 aa13.32□□□□□ -0.28
SF3B3-202ENST00000562722 ERBB2P04626 1255 aa13.32□□□□□ -0.28
SF3B3-202ENST00000562722 THEGLP0DJG4 465 aa13.32□□□□□ -0.28
SF3B3-202ENST00000562722 GLDCP23378 1020 aa13.32□□□□□ -0.28
SF3B3-202ENST00000562722 ITPKBP27987 946 aa13.32□□□□□ -0.28
SF3B3-202ENST00000562722 VASPP50552 380 aaPredicted RBP13.32□□□□□ -0.28
SF3B3-202ENST00000562722 CDH4P55283 916 aa13.32□□□□□ -0.28
SF3B3-202ENST00000562722 RNASE9P60153 205 aaKnown RBP13.32□□□□□ -0.28
SF3B3-202ENST00000562722 CCDC15Q0P6D6 951 aa13.32□□□□□ -0.28
SF3B3-202ENST00000562722 EXOC3L4Q17RC7 722 aa13.32□□□□□ -0.28
SF3B3-202ENST00000562722 OLFML1Q6UWY5 402 aa13.32□□□□□ -0.28
SF3B3-202ENST00000562722 C14orf80Q86SX3 495 aa13.32□□□□□ -0.28
SF3B3-202ENST00000562722 BAP1Q92560 729 aa13.32□□□□□ -0.28
SF3B3-202ENST00000562722 FAM131CQ96AQ9 280 aa13.32□□□□□ -0.28
SF3B3-202ENST00000562722 ALG14Q96F25 216 aa13.32□□□□□ -0.28
SF3B3-202ENST00000562722 CALN1Q9BXU9 219 aa13.32□□□□□ -0.28
SF3B3-202ENST00000562722 NRSN2Q9GZP1 204 aa13.32□□□□□ -0.28
SF3B3-202ENST00000562722 TKTL2Q9H0I9 626 aa13.32□□□□□ -0.28
SF3B3-202ENST00000562722 PCDHGC3Q9UN70 934 aa13.32□□□□□ -0.28
SF3B3-202ENST00000562722 CLCA2Q9UQC9 943 aa13.32□□□□□ -0.28
SF3B3-202ENST00000562722 URB1O60287 2271 aaKnown RBP13.32□□□□□ -0.28
SF3B3-202ENST00000562722 NBEAQ8NFP9 2946 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 FFAR2O15552 330 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 SIGLEC6O43699 453 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 TLX3O43711 291 aaPredicted RBP13.31□□□□□ -0.28
SF3B3-202ENST00000562722 SNAP91O60641 907 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 CNTN5O94779 1100 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 PCDH8O95206 1070 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 ADCY5O95622 1261 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 SRCP12931 536 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 RRM1P23921 792 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 AKT2P31751 481 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 CHRNA3P32297 505 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 NOS2P35228 1153 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 EIF2S3P41091 472 aaKnown RBP13.31□□□□□ -0.28
SF3B3-202ENST00000562722 RECQLP46063 649 aaPredicted RBP13.31□□□□□ -0.28
SF3B3-202ENST00000562722 MTIF2P46199 727 aaKnown RBP13.31□□□□□ -0.28
SF3B3-202ENST00000562722 SULT1E1P49888 294 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 SLC6A3Q01959 620 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 LRRC31Q6UY01 552 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 KDM7AQ6ZMT4 941 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 GRIN3AQ8TCU5 1115 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 SHC3Q92529 594 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 UBL7Q96S82 380 aaPredicted RBP13.31□□□□□ -0.28
SF3B3-202ENST00000562722 WDCPQ9H6R7 721 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 FZD3Q9NPG1 666 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 PLCB1Q9NQ66 1216 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 PIGVQ9NUD9 493 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 VPS51Q9UID3 782 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 RWDD2AQ9UIY3 292 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms