RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 CHP1Q99653 195 aa15.76■□□□□ 0.11
CCNDBP1-203ENST00000562553 MRPL47Q9HD33 250 aaKnown RBP15.76■□□□□ 0.11
CCNDBP1-203ENST00000562553 TMEM248Q9NWD8 314 aa15.76■□□□□ 0.11
CCNDBP1-203ENST00000562553 WSB2Q9NYS7 404 aaPredicted RBP15.76■□□□□ 0.11
CCNDBP1-203ENST00000562553 PCSK1NQ9UHG2 260 aa15.76■□□□□ 0.11
CCNDBP1-203ENST00000562553 DNAI1Q9UI46 699 aa15.76■□□□□ 0.11
CCNDBP1-203ENST00000562553 TARSL2A2RTX5 802 aaKnown RBP15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 K7ERQ8 282 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 ATP9BO43861 1147 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 LRCH4O75427 683 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 IGLV3-19P01714 112 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 CYP1A2P05177 515 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 TPM1P09493 284 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 SRCP12931 536 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 ITPKAP23677 461 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 MIPP30301 263 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 ACVRL1P37023 503 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 NNMTP40261 264 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 MAPKAPK2P49137 400 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 VASPP50552 380 aaPredicted RBP15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 AIF1P55008 147 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 KRT83P78385 493 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 MAPK8IP2Q13387 824 aaPredicted RBP15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 DLG2Q15700 870 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 LYSMD4Q5XG99 296 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 TCEAL6Q6IPX3 200 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 ZNF783Q6ZMS7 281 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 PRR23CQ6ZRP0 262 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 Q6ZVU0 165 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 MMAAQ8IVH4 418 aaKnown RBP15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 SH2D3CQ8N5H7 860 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 NETO1Q8TDF5 533 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 PIGKQ92643 395 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 TCEAL3Q969E4 200 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 FAM129BQ96TA1 746 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 SPON2Q9BUD6 331 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 SNRNP25Q9BV90 132 aaKnown RBP15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 C2orf49Q9BVC5 232 aaPredicted RBP15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 NUP85Q9BW27 656 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 PACSIN1Q9BY11 444 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 ATP13A1Q9HD20 1204 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 AP4E1Q9UPM8 1137 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 HS3ST2Q9Y278 367 aa15.75■□□□□ 0.11
CCNDBP1-203ENST00000562553 NCOR2Q9Y618 2525 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 ADAMTS9Q9P2N4 1935 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 SSU72P8A0A1W2PR75 194 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 PATE3B3GLJ2 98 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 CBX4O00257 560 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 MID1O15344 667 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 SMAD6O43541 496 aaKnown RBP15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 NDUFS2O75306 463 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 ZMPSTE24O75844 475 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 RNF8O76064 485 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 DNTTP04053 509 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 ZNF806P0C7X5 589 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 TCF4P15884 667 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 EPHB2P29323 1055 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 ARF5P84085 180 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 ZNF33AQ06730 810 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 SLC18A3Q16572 532 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 ACCSLQ4AC99 568 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 SPDYCQ5MJ68 293 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 ARHGEF2Q92974 986 aaKnown RBP15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 HSPA12BQ96MM6 686 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 KCTD15Q96SI1 283 aaPredicted RBP15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 EPAS1Q99814 870 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 GPR174Q9BXC1 333 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 PABPC3Q9H361 631 aaKnown RBP15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 DHX35Q9H5Z1 703 aaKnown RBP15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 NOL6Q9H6R4 1146 aaKnown RBP15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 VPS45Q9NRW7 570 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 RXFP3Q9NSD7 469 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 TMEM74BQ9NUR3 256 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 ZNHIT6Q9NWK9 470 aaKnown RBP15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 SERGEFQ9UGK8 458 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 ANAPC7Q9UJX3 599 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 ACTL7AQ9Y615 435 aa15.74■□□□□ 0.11
CCNDBP1-203ENST00000562553 LAMA1P25391 3075 aa15.73■□□□□ 0.11
CCNDBP1-203ENST00000562553 AKR1B15C9JRZ8 316 aaPredicted RBP15.73■□□□□ 0.11
CCNDBP1-203ENST00000562553 SLC30A4O14863 429 aa15.73■□□□□ 0.11
CCNDBP1-203ENST00000562553 PRPSAP2O60256 369 aa15.73■□□□□ 0.11
CCNDBP1-203ENST00000562553 GDF9O60383 454 aa15.73■□□□□ 0.11
CCNDBP1-203ENST00000562553 IL1R2P27930 398 aa15.73■□□□□ 0.11
CCNDBP1-203ENST00000562553 ACSL1P33121 698 aa15.73■□□□□ 0.11
CCNDBP1-203ENST00000562553 PSMD8P48556 350 aa15.73■□□□□ 0.11
CCNDBP1-203ENST00000562553 ZNF75DP51815 510 aa15.73■□□□□ 0.11
CCNDBP1-203ENST00000562553 METAP1P53582 386 aa15.73■□□□□ 0.11
CCNDBP1-203ENST00000562553 ZBTB16Q05516 673 aa15.73■□□□□ 0.11
CCNDBP1-203ENST00000562553 ELAVL3Q14576 367 aaKnown RBP15.73■□□□□ 0.11
CCNDBP1-203ENST00000562553 CST6Q15828 149 aa15.73■□□□□ 0.11
CCNDBP1-203ENST00000562553 ERMARDQ5T6L9 678 aa15.73■□□□□ 0.11
CCNDBP1-203ENST00000562553 RTL3Q8N8U3 475 aaKnown RBP15.73■□□□□ 0.11
CCNDBP1-203ENST00000562553 ATP11CQ8NB49 1132 aa15.73■□□□□ 0.11
CCNDBP1-203ENST00000562553 ZNF419Q96HQ0 510 aaPredicted RBP15.73■□□□□ 0.11
CCNDBP1-203ENST00000562553 ACE2Q9BYF1 805 aaPredicted RBP15.73■□□□□ 0.11
CCNDBP1-203ENST00000562553 DEF6Q9H4E7 631 aa15.73■□□□□ 0.11
CCNDBP1-203ENST00000562553 SPTLC3Q9NUV7 552 aa15.73■□□□□ 0.11
CCNDBP1-203ENST00000562553 A0A1W2PP55 124 aa15.72■□□□□ 0.11
CCNDBP1-203ENST00000562553 BNIP3LO60238 219 aa15.72■□□□□ 0.11
CCNDBP1-203ENST00000562553 RAMP2O60895 175 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms