RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 DNAI1Q9UI46 699 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 VPS28Q9UK41 221 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 PLA2G4CQ9UP65 541 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 PCDHGA2Q9Y5H1 932 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 WDR87Q6ZQQ6 2873 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 SPAG17Q6Q759 2223 aa13.74□□□□□ -0.21
CDH1-204ENST00000562118 KDELR3O43731 214 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 SNAP91O60641 907 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 IGLV3-19P01714 112 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 SRCP12931 536 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 GABRG2P18507 467 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 GLDCP23378 1020 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 KDELR1P24390 212 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 CTNNA1P35221 906 aaKnown RBP13.73□□□□□ -0.21
CDH1-204ENST00000562118 ACVRL1P37023 503 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 ARL4AP40617 200 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 NBL1P41271 181 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 STK19P49842 368 aaPredicted RBP13.73□□□□□ -0.21
CDH1-204ENST00000562118 SERPINH1P50454 418 aaKnown RBP13.73□□□□□ -0.21
CDH1-204ENST00000562118 CDH6P55285 790 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 SLC20A2Q08357 652 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 DMWDQ09019 674 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 KIF5AQ12840 1032 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 POLD3Q15054 466 aaPredicted RBP13.73□□□□□ -0.21
CDH1-204ENST00000562118 PAFAH1B3Q15102 231 aaKnown RBP13.73□□□□□ -0.21
CDH1-204ENST00000562118 PPP6R3Q5H9R7 873 aaPredicted RBP13.73□□□□□ -0.21
CDH1-204ENST00000562118 C9orf64Q5T6V5 341 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 SERPINA13PQ6UXR4 307 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 LONP2Q86WA8 852 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 PLPP6Q8IY26 295 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 KATNAL2Q8IYT4 538 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 PQLC3Q8N755 202 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 MDGA1Q8NFP4 955 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 PCDH19Q8TAB3 1148 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 RAPGEF5Q92565 580 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 PTPRN2Q92932 1015 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 FAM131CQ96AQ9 280 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 ISG20Q96AZ6 181 aaKnown RBP13.73□□□□□ -0.21
CDH1-204ENST00000562118 HHIPQ96QV1 700 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 TSGA10Q9BZW7 698 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 CEP44Q9C0F1 390 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 MUC3BQ9H195 1237 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 GOLPH3Q9H4A6 298 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 POLMQ9NP87 494 aaPredicted RBP13.73□□□□□ -0.21
CDH1-204ENST00000562118 ETNK2Q9NVF9 386 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 TRIM10Q9UDY6 481 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 SLCO3A1Q9UIG8 710 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 SLC8A2Q9UPR5 921 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 HCN4Q9Y3Q4 1203 aa13.73□□□□□ -0.21
CDH1-204ENST00000562118 ZSCAN5CA6NGD5 496 aaPredicted RBP13.72□□□□□ -0.21
CDH1-204ENST00000562118 RASA4BC9J798 803 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 PROB1E7EW31 1015 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 RASA4O43374 803 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 MT-CO1P00395 513 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 NDUFV2P19404 249 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 CTNNA2P26232 953 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 NOP2P46087 812 aaKnown RBP13.72□□□□□ -0.21
CDH1-204ENST00000562118 PEX5P50542 639 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 CSTF1Q05048 431 aaKnown RBP13.72□□□□□ -0.21
CDH1-204ENST00000562118 ANKRD20A8PQ5CZ79 823 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 NCBP2-AS2Q69YL0 99 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 SLC9A4Q6AI14 798 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 SDE2Q6IQ49 451 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 TSSK4Q6SA08 328 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 KIAA1328Q86T90 577 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 NT5DC3Q86UY8 548 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 MAP7D3Q8IWC1 876 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 TSTD1Q8NFU3 115 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 OR2T3Q8NH03 318 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 CASKIN2Q8WXE0 1202 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 FATE1Q969F0 183 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 HMCESQ96FZ2 354 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 MRGPRX1Q96LB2 322 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 MKRN2Q9H000 416 aaKnown RBP13.72□□□□□ -0.21
CDH1-204ENST00000562118 RSPH9Q9H1X1 276 aaPredicted RBP13.72□□□□□ -0.21
CDH1-204ENST00000562118 ATP13A1Q9HD20 1204 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 PRSS16Q9NQE7 514 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 DDX56Q9NY93 547 aaKnown RBP13.72□□□□□ -0.21
CDH1-204ENST00000562118 USP36Q9P275 1121 aaKnown RBP13.72□□□□□ -0.21
CDH1-204ENST00000562118 SUN2Q9UH99 717 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 MFHAS1Q9Y4C4 1052 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 CAPN6Q9Y6Q1 641 aa13.72□□□□□ -0.21
CDH1-204ENST00000562118 CEP192Q8TEP8 1941 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 EDDM13A0A1B0GTR0 161 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 TTC34A8MYJ7 566 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 ALOX15BO15296 676 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 BUB1O43683 1085 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 PRAMEF11O60813 436 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 PEX11BO96011 259 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 CCDC175P0C221 793 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 HLA-EP13747 358 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 AMPD1P23109 780 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 CNR2P34972 360 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 PTPN7P35236 360 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 CDKN2BP42772 138 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 GEMIN4P57678 1058 aaKnown RBP13.71□□□□□ -0.21
CDH1-204ENST00000562118 MMRN1Q13201 1228 aa13.71□□□□□ -0.21
CDH1-204ENST00000562118 IFI16Q16666 785 aaKnown RBP13.71□□□□□ -0.21
CDH1-204ENST00000562118 FNDC3BQ53EP0 1204 aaKnown RBP13.71□□□□□ -0.21
CDH1-204ENST00000562118 INO80DQ53TQ3 878 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms