RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 WDR47O94967 919 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 BAG2O95816 211 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 NPSP0C0P6 89 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 KIF5BP33176 963 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 ADD2P35612 726 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 GRIA3P42263 894 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 RAD52P43351 418 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 E2F1Q01094 437 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 CALD1Q05682 793 aaKnown RBP4.46□□□□□ -1.7
LRRC28-222ENST00000561431 TRIM29Q14134 588 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 RPS6KA2Q15349 733 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 PCID2Q5JVF3 399 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 ZNF569Q5MCW4 686 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 HECTD2Q5U5R9 776 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 SPATA1Q5VX52 437 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 LAIR1Q6GTX8 287 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 Q6YL49 198 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 COPS6Q7L5N1 327 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 GALNT5Q7Z7M9 940 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 CACNA2D3Q8IZS8 1091 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 METTL25Q8N6Q8 603 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 TSPYL6Q8N831 410 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 BEND2Q8NDZ0 799 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 ZG16BQ96DA0 208 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 AP1M1Q9BXS5 423 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 TMEM8AQ9HCN3 771 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 SNX15Q9NRS6 342 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 TBC1D22BQ9NU19 505 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 MGAT4CQ9UBM8 478 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 DBF4Q9UBU7 674 aaPredicted RBP4.46□□□□□ -1.7
LRRC28-222ENST00000561431 VPS51Q9UID3 782 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 HERC5Q9UII4 1024 aaKnown RBP4.46□□□□□ -1.7
LRRC28-222ENST00000561431 AMFRQ9UKV5 643 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 SCAF8Q9UPN6 1271 aaKnown RBP4.46□□□□□ -1.7
LRRC28-222ENST00000561431 DTNAQ9Y4J8 743 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 SNX5Q9Y5X3 404 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 LTBP1Q14766 1721 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 RNF123Q5XPI4 1314 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 ZNF521Q96K83 1311 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 FANCIQ9NVI1 1328 aa4.46□□□□□ -1.7
LRRC28-222ENST00000561431 LINC00473A8K010 186 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 SMTNL1A8MU46 457 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 IPO5O00410 1097 aaKnown RBP4.45□□□□□ -1.7
LRRC28-222ENST00000561431 IRAK2O43187 625 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 ACTL6BO94805 426 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 ANXA6P08133 673 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 CAPN3P20807 821 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 RPS6KB1P23443 525 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 GKP32189 559 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 CXCR5P32302 372 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 PLA2G5P39877 138 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 PBX1P40424 430 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 CCT8P50990 548 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 DGKQP52824 942 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 SEC24CP53992 1094 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 EEFSECP57772 596 aaKnown RBP4.45□□□□□ -1.7
LRRC28-222ENST00000561431 BPIFB3P59826 476 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 AIMP1Q12904 312 aaKnown RBP4.45□□□□□ -1.7
LRRC28-222ENST00000561431 SEMA3BQ13214 749 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 CLCA4Q14CN2 919 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 PARP10Q53GL7 1025 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 TMEM196Q5HYL7 178 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 AKNAD1Q5T1N1 836 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 LRCH2Q5VUJ6 765 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 OLFM4Q6UX06 510 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 LDHAL6AQ6ZMR3 332 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 Q6ZWC4 215 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 WDR53Q7Z5U6 358 aaPredicted RBP4.45□□□□□ -1.7
LRRC28-222ENST00000561431 SAMD14Q8IZD0 417 aaPredicted RBP4.45□□□□□ -1.7
LRRC28-222ENST00000561431 GALNT15Q8N3T1 639 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 LSMEM1Q8N8F7 131 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 ARL10Q8N8L6 244 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 RP9Q8TA86 221 aaKnown RBP4.45□□□□□ -1.7
LRRC28-222ENST00000561431 SUN3Q8TAQ9 357 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 SLC9A6Q92581 669 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 LARP4BQ92615 738 aaKnown RBP4.45□□□□□ -1.7
LRRC28-222ENST00000561431 RFKQ969G6 155 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 SH3KBP1Q96B97 665 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 HVCN1Q96D96 273 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 RSPRY1Q96DX4 576 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 VMP1Q96GC9 406 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 MASTLQ96GX5 879 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 PRR25Q96S07 402 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 RTKNQ9BST9 563 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 TTPALQ9BTX7 342 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 ISCA1Q9BUE6 129 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 KATNAL1Q9BW62 490 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 NYXQ9GZU5 481 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 TAF1DQ9H5J8 278 aaPredicted RBP4.45□□□□□ -1.7
LRRC28-222ENST00000561431 SEPSECSQ9HD40 501 aaKnown RBP4.45□□□□□ -1.7
LRRC28-222ENST00000561431 TRIM36Q9NQ86 728 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 BLOC1S4Q9NUP1 217 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 FBXO28Q9NVF7 368 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 HYPKQ9NX55 129 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 DCAF16Q9NXF7 216 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 NKIRAS2Q9NYR9 191 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 GJD2Q9UKL4 321 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 IKBKGQ9Y6K9 419 aa4.45□□□□□ -1.7
LRRC28-222ENST00000561431 DICER1Q9UPY3 1922 aaKnown RBP4.44□□□□□ -1.7
LRRC28-222ENST00000561431 WDR90Q96KV7 1748 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms