RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 DFNA5O60443 496 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 PAGE1O75459 146 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 DAB1O75553 588 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 CNTN5O94779 1100 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 MAT2AP31153 395 aaKnown RBP11.96□□□□□ -0.49
USP3-220ENST00000561381 KRT9P35527 623 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 RNASE9P60153 205 aaKnown RBP11.96□□□□□ -0.49
USP3-220ENST00000561381 SLC6A3Q01959 620 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 PTK2Q05397 1052 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 ZNF177Q13360 481 aaPredicted RBP11.96□□□□□ -0.49
USP3-220ENST00000561381 CAMK2BQ13554 666 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 DLG2Q15700 870 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 ACCSLQ4AC99 568 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 ALFQ53S48 1182 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 TTC39BQ5VTQ0 682 aaPredicted RBP11.96□□□□□ -0.49
USP3-220ENST00000561381 DPY19L2P1Q6NXN4 242 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 Q6ZVU0 165 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 SLC26A9Q7LBE3 791 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 SAP25Q8TEE9 199 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 OR8D1Q8WZ84 308 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 FAM131CQ96AQ9 280 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 SPAG5Q96R06 1193 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 SIK2Q9H0K1 926 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 TMPRSS4Q9NRS4 437 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 PIGVQ9NUD9 493 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 ARHGAP20Q9P2F6 1191 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 FTSJ1Q9UET6 329 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 VPS28Q9UK41 221 aa11.96□□□□□ -0.49
USP3-220ENST00000561381 CELSR3Q9NYQ7 3312 aa11.96□□□□□ -0.5
USP3-220ENST00000561381 TRABD2BA6NFA1 517 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 K7ERQ8 282 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 TLR4O00206 839 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 RNF103O00237 685 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 PLRG1O43660 514 aaKnown RBP11.95□□□□□ -0.5
USP3-220ENST00000561381 SNAP91O60641 907 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 ADCY5O95622 1261 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 MT-CO1P00395 513 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 ITGAVP06756 1048 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 NOS2P35228 1153 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 OXCT1P55809 520 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 NXPH1P58417 271 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 UBE2HP62256 183 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 CYP4F3Q08477 520 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 CNTN1Q12860 1018 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 BNIP3Q12983 259 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 DNAJC3Q13217 504 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 SMAD1Q15797 465 aaKnown RBP11.95□□□□□ -0.5
USP3-220ENST00000561381 HSP90AA4PQ58FG1 418 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 AGBL4Q5VU57 503 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 SPATS2Q86XZ4 545 aaKnown RBP11.95□□□□□ -0.5
USP3-220ENST00000561381 FAM71AQ8IYT1 594 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 GALNT15Q8N3T1 639 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 EID2Q8N6I1 236 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 ZNF397Q8NF99 534 aaPredicted RBP11.95□□□□□ -0.5
USP3-220ENST00000561381 HNRNPLLQ8WVV9 542 aaKnown RBP11.95□□□□□ -0.5
USP3-220ENST00000561381 ZDHHC16Q969W1 377 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 SKA1Q96BD8 255 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 CNDP2Q96KP4 475 aaKnown RBP11.95□□□□□ -0.5
USP3-220ENST00000561381 NOX5Q96PH1 765 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 PSMB7Q99436 277 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 NPY6RQ99463 290 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 TKTL2Q9H0I9 626 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 SYNCQ9H7C4 482 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 GDF3Q9NR23 364 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 SLC25A13Q9UJS0 675 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 PPM1HQ9ULR3 514 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 CA5BQ9Y2D0 317 aa11.95□□□□□ -0.5
USP3-220ENST00000561381 URB1O60287 2271 aaKnown RBP11.95□□□□□ -0.5
USP3-220ENST00000561381 ARID1BQ8NFD5 2236 aaPredicted RBP11.95□□□□□ -0.5
USP3-220ENST00000561381 ANKRD11Q6UB99 2663 aaPredicted RBP11.94□□□□□ -0.5
USP3-220ENST00000561381 ENC1O14682 589 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 CTSLP07711 333 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 EPHA8P29322 1005 aaPredicted RBP11.94□□□□□ -0.5
USP3-220ENST00000561381 CDH4P55283 916 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 TAS2R38P59533 333 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 COL9A2Q14055 689 aaPredicted RBP11.94□□□□□ -0.5
USP3-220ENST00000561381 DRAP1Q14919 205 aaPredicted RBP11.94□□□□□ -0.5
USP3-220ENST00000561381 MAN2A1Q16706 1144 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 COL28A1Q2UY09 1125 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 INAVAQ3KP66 663 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 C5orf22Q49AR2 442 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 C2CD6Q53TS8 623 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 MIIPQ5JXC2 388 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 ARTNQ5T4W7 220 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 NAPEPLDQ6IQ20 393 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 TRNP1Q6NT89 227 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 PRPF39Q86UA1 669 aaKnown RBP11.94□□□□□ -0.5
USP3-220ENST00000561381 ZNF683Q8IZ20 524 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 SH2D3CQ8N5H7 860 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 MLKLQ8NB16 471 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 PIP4K2CQ8TBX8 421 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 MUC3BQ9H195 1237 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 WDCPQ9H6R7 721 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 CAAP1Q9H8G2 361 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 ARHGEF38Q9NXL2 777 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.94□□□□□ -0.5
USP3-220ENST00000561381 MPP6Q9NZW5 540 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 TBC1D30Q9Y2I9 924 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 FHOD1Q9Y613 1164 aa11.94□□□□□ -0.5
USP3-220ENST00000561381 DSPP15924 2871 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms