RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 SERINC3Q13530 473 aa17.48■□□□□ 0.39
HDDC3-206ENST00000561036 TERF2Q15554 542 aa17.48■□□□□ 0.39
HDDC3-206ENST00000561036 GAREM2Q75VX8 874 aa17.48■□□□□ 0.39
HDDC3-206ENST00000561036 TAOK1Q7L7X3 1001 aa17.48■□□□□ 0.39
HDDC3-206ENST00000561036 LINC00523Q86TU6 105 aa17.48■□□□□ 0.39
HDDC3-206ENST00000561036 CNPY4Q8N129 248 aa17.48■□□□□ 0.39
HDDC3-206ENST00000561036 LEMD2Q8NC56 503 aa17.48■□□□□ 0.39
HDDC3-206ENST00000561036 ZNF599Q96NL3 588 aa17.48■□□□□ 0.39
HDDC3-206ENST00000561036 CYTH2Q99418 400 aa17.48■□□□□ 0.39
HDDC3-206ENST00000561036 GORASP1Q9BQQ3 440 aa17.48■□□□□ 0.39
HDDC3-206ENST00000561036 CNOT10Q9H9A5 744 aaKnown RBP17.48■□□□□ 0.39
HDDC3-206ENST00000561036 CASS4Q9NQ75 786 aa17.48■□□□□ 0.39
HDDC3-206ENST00000561036 ASAH2Q9NR71 780 aa17.48■□□□□ 0.39
HDDC3-206ENST00000561036 RBM22Q9NW64 420 aaKnown RBP eCLIP17.48■□□□□ 0.39
HDDC3-206ENST00000561036 EURLQ9NYK6 297 aa17.48■□□□□ 0.39
HDDC3-206ENST00000561036 DPP7Q9UHL4 492 aa17.48■□□□□ 0.39
HDDC3-206ENST00000561036 PCDHA11Q9Y5I1 949 aa17.48■□□□□ 0.39
HDDC3-206ENST00000561036 NUP205Q92621 2012 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 TRAV19A0A0A6YYK7 116 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 NEBLO76041 1014 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 PEX11BO96011 259 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 POU2F2P09086 479 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 HNRNPA1P09651 372 aaKnown RBP eCLIP17.47■□□□□ 0.39
HDDC3-206ENST00000561036 GEMP55040 296 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 PPP2R2AP63151 447 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 ARMC3Q5W041 872 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 STEAP4Q687X5 459 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 TXNDC8Q6A555 127 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 NAPEPLDQ6IQ20 393 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 ELMSAN1Q6PJG2 1045 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 ZNF783Q6ZMS7 281 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 SETD3Q86TU7 594 aaPredicted RBP17.47■□□□□ 0.39
HDDC3-206ENST00000561036 AGGF1Q8N302 714 aaeCLIP17.47■□□□□ 0.39
HDDC3-206ENST00000561036 TEX26Q8N6G2 289 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 ARL14EPQ8N8R7 260 aaPredicted RBP17.47■□□□□ 0.39
HDDC3-206ENST00000561036 MICAL1Q8TDZ2 1067 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 FBF1Q8TES7 1133 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 STAMBPL1Q96FJ0 436 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 TGS1Q96RS0 853 aaKnown RBP17.47■□□□□ 0.39
HDDC3-206ENST00000561036 DHRS4Q9BTZ2 278 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 MLPHQ9BV36 600 aaPredicted RBP17.47■□□□□ 0.39
HDDC3-206ENST00000561036 SP110Q9HB58 689 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 HAUS2Q9NVX0 235 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 ACTL7BQ9Y614 415 aa17.47■□□□□ 0.39
HDDC3-206ENST00000561036 ZFP37Q9Y6Q3 630 aaPredicted RBP17.47■□□□□ 0.39
HDDC3-206ENST00000561036 OBSL1O75147 1896 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.46■□□□□ 0.39
HDDC3-206ENST00000561036 A0A1B0GVM2 712 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 ILVBLA1L0T0 632 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 TCAF2A6NFQ2 919 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 H3BNC9 293 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 GRM6O15303 877 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 PTPN2P17706 415 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 ETFBP38117 255 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 GRIA1P42261 906 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 NPY2RP49146 381 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 ERVK-21P61565 698 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 ZNF177Q13360 481 aaPredicted RBP17.46■□□□□ 0.39
HDDC3-206ENST00000561036 FAM182AQ5T1J6 154 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 MARC1Q5VT66 337 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 RFWD3Q6PCD5 774 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 Q6ZNB5 142 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 FAM217AQ8IXS0 508 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 HS6ST3Q8IZP7 471 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 MYEOVQ96EZ4 313 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 CFAP36Q96G28 342 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 XPO6Q96QU8 1125 aaKnown RBP17.46■□□□□ 0.39
HDDC3-206ENST00000561036 SLC22A12Q96S37 553 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 SLC25A51Q9H1U9 297 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 PSMC3IPQ9P2W1 217 aaPredicted RBP17.46■□□□□ 0.39
HDDC3-206ENST00000561036 LSM7Q9UK45 103 aaKnown RBP17.46■□□□□ 0.39
HDDC3-206ENST00000561036 TBC1D30Q9Y2I9 924 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 CPQQ9Y646 472 aa17.46■□□□□ 0.39
HDDC3-206ENST00000561036 TCRBV9S1A1TA0A576 114 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 MAGEB16A2A368 324 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 F5H423 210 aaPredicted RBP17.45■□□□□ 0.38
HDDC3-206ENST00000561036 GFRA2O00451 464 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 CCL16O15467 120 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 GREM1O60565 184 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 PRAMEF11O60813 436 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 CLASP2O75122 1294 aaKnown RBP17.45■□□□□ 0.38
HDDC3-206ENST00000561036 HLA-DQB2P05538 268 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 IRF1P10914 325 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 PRKCHP24723 683 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 GCAP28676 217 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 HPDP32754 393 aaPredicted RBP17.45■□□□□ 0.38
HDDC3-206ENST00000561036 GNA12Q03113 381 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 CAMK1Q14012 370 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 FRG1Q14331 258 aaKnown RBP17.45■□□□□ 0.38
HDDC3-206ENST00000561036 TMCO4Q5TGY1 634 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 ZNF449Q6P9G9 518 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 CAPN12Q6ZSI9 719 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 HTR3DQ70Z44 454 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 OTOP3Q7RTS5 596 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 CIR1Q86X95 450 aaPredicted RBP17.45■□□□□ 0.38
HDDC3-206ENST00000561036 CFAP52Q8N1V2 620 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 HJURPQ8NCD3 748 aaPredicted RBP17.45■□□□□ 0.38
HDDC3-206ENST00000561036 GSDMBQ8TAX9 411 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 ADAMTS19Q8TE59 1207 aa17.45■□□□□ 0.38
HDDC3-206ENST00000561036 USP33Q8TEY7 942 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms