RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 MCF2LO15068 1137 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 MED7O43513 233 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 THEGLP0DJG4 465 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 CKMT1AP12532 417 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 VAV1P15498 845 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 CCR1P32246 355 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 GPD2P43304 727 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 RPL34P49207 117 aaKnown RBP12.39□□□□□ -0.43
MARK3-221ENST00000560603 ERVPABLB-1P60509 514 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 YWHAZP63104 245 aaKnown RBP12.39□□□□□ -0.43
MARK3-221ENST00000560603 CDK17Q00537 523 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 GCNT1Q02742 428 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 KCNMA1Q12791 1236 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 DLG2Q15700 870 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 MEA1Q16626 185 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 CCDC40Q4G0X9 1142 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 AGBL4Q5VU57 503 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 SYPL2Q5VXT5 272 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 SLC25A45Q8N413 288 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 FAM174AQ8TBP5 190 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 IFT43Q96FT9 208 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 CEP63Q96MT8 703 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 ZSWIM1Q9BR11 485 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 ABCG4Q9H172 646 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 THAP9Q9H5L6 903 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 FAM204AQ9H8W3 233 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 USP29Q9HBJ7 922 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 DYRK4Q9NR20 520 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 SARDHQ9UL12 918 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 PPM1HQ9ULR3 514 aa12.39□□□□□ -0.43
MARK3-221ENST00000560603 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.38□□□□□ -0.43
MARK3-221ENST00000560603 PSMA7O14818 248 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 SLC31A1O15431 190 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 OPA1O60313 960 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 DXOO77932 396 aaKnown RBP12.38□□□□□ -0.43
MARK3-221ENST00000560603 IGLV3-25P01717 112 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 GP1BAP07359 652 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 HNRNPA2B1P22626 353 aaKnown RBP12.38□□□□□ -0.43
MARK3-221ENST00000560603 LSSP48449 732 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 METAP1P53582 386 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 GABREP78334 506 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 ZNF177Q13360 481 aaPredicted RBP12.38□□□□□ -0.43
MARK3-221ENST00000560603 PNOCQ13519 176 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 POM121L1PQ3SYA9 428 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 Q6ZVU0 165 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 RRAGAQ7L523 313 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 TMC6Q7Z403 805 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 CIR1Q86X95 450 aaPredicted RBP12.38□□□□□ -0.43
MARK3-221ENST00000560603 DCP2Q8IU60 420 aaKnown RBP12.38□□□□□ -0.43
MARK3-221ENST00000560603 TMEM145Q8NBT3 493 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 NAF1Q96HR8 494 aaKnown RBP12.38□□□□□ -0.43
MARK3-221ENST00000560603 RPRD1AQ96P16 312 aaPredicted RBP12.38□□□□□ -0.43
MARK3-221ENST00000560603 DUSP23Q9BVJ7 150 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 CALN1Q9BXU9 219 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 SLC4A5Q9BY07 1137 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 DPH1Q9BZG8 443 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 GOLPH3LQ9H4A5 285 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 POLR1BQ9H9Y6 1135 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 THSD1Q9NS62 852 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 HOOK1Q9UJC3 728 aaKnown RBP12.38□□□□□ -0.43
MARK3-221ENST00000560603 VPS28Q9UK41 221 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 NYNRINQ9P2P1 1898 aaKnown RBP12.38□□□□□ -0.43
MARK3-221ENST00000560603 HECTD1Q9ULT8 2610 aa12.38□□□□□ -0.43
MARK3-221ENST00000560603 A0A1W2PQU0 124 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 RIOK3O14730 519 aaKnown RBP12.37□□□□□ -0.43
MARK3-221ENST00000560603 FFAR2O15552 330 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 BNIP3LO60238 219 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 USP12O75317 370 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 CLDN11O75508 207 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 PIAS2O75928 621 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 MPOP05164 745 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 GLI1P08151 1106 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 KRT5P13647 590 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 PPP1R2P41236 205 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 NUMBP49757 651 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 HNRNPKP61978 463 aaKnown RBP eCLIP12.37□□□□□ -0.43
MARK3-221ENST00000560603 KRT83P78385 493 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 CDCP2Q5VXM1 449 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 CXorf57Q6NSI4 855 aaKnown RBP12.37□□□□□ -0.43
MARK3-221ENST00000560603 TMEM110Q86TL2 294 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 HORMAD1Q86X24 394 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 SH2D3CQ8N5H7 860 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 KCNE4Q8WWG9 221 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 KAT5Q92993 513 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 SMARCE1Q969G3 411 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 GRAMD1AQ96CP6 724 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 HIC2Q96JB3 615 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 PRMT1Q99873 361 aaKnown RBP12.37□□□□□ -0.43
MARK3-221ENST00000560603 FEM1AQ9BSK4 669 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 DDIT4Q9NX09 232 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 NLGN3Q9NZ94 848 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 NCKIPSDQ9NZQ3 722 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 PCDHB1Q9Y5F3 818 aa12.37□□□□□ -0.43
MARK3-221ENST00000560603 TDRD6O60522 2096 aaKnown RBP12.36□□□□□ -0.43
MARK3-221ENST00000560603 DOCK9Q9BZ29 2069 aa12.36□□□□□ -0.43
MARK3-221ENST00000560603 SYNJ2BP-COX16A0A087WUM0 186 aa12.36□□□□□ -0.43
MARK3-221ENST00000560603 TRIM49BA6NDI0 452 aa12.36□□□□□ -0.43
MARK3-221ENST00000560603 E5RJQ4 531 aa12.36□□□□□ -0.43
MARK3-221ENST00000560603 KPNA3O00505 521 aaPredicted RBP12.36□□□□□ -0.43
MARK3-221ENST00000560603 KLK10O43240 276 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms