RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 TTC12Q9H892 705 aaPredicted RBP4.15□□□□□ -1.75
USP8-211ENST00000560527 TLR8Q9NR97 1041 aaKnown RBP4.15□□□□□ -1.75
USP8-211ENST00000560527 PPP1R14DQ9NXH3 145 aa4.15□□□□□ -1.75
USP8-211ENST00000560527 ALKBH4Q9NXW9 302 aa4.15□□□□□ -1.75
USP8-211ENST00000560527 UPB1Q9UBR1 384 aa4.15□□□□□ -1.75
USP8-211ENST00000560527 HSF4Q9ULV5 492 aa4.15□□□□□ -1.75
USP8-211ENST00000560527 CLDN16Q9Y5I7 305 aa4.15□□□□□ -1.75
USP8-211ENST00000560527 TRBV5-3A0A0A0MS03 114 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 OR6C68A6NDL8 312 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 A6NLC8 198 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 STRNO43815 780 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 KIF1CO43896 1103 aaKnown RBP4.14□□□□□ -1.75
USP8-211ENST00000560527 SH3BP5O60239 455 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 NEURL1O76050 574 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 CHRM4P08173 479 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 HNRNPA1P09651 372 aaKnown RBP eCLIP4.14□□□□□ -1.75
USP8-211ENST00000560527 FCGR2AP12318 317 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 KELP23276 732 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 PRKCHP24723 683 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 ELF1P32519 619 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 SKIV2L2P42285 1042 aaKnown RBP4.14□□□□□ -1.75
USP8-211ENST00000560527 LIFRP42702 1097 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 CPA2P48052 419 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 TUBP50607 506 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 CYP2J2P51589 502 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 SSBP2P81877 361 aaPredicted RBP4.14□□□□□ -1.75
USP8-211ENST00000560527 CAMK1Q14012 370 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 TRIP6Q15654 476 aaKnown RBP4.14□□□□□ -1.75
USP8-211ENST00000560527 GPR68Q15743 365 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 MIDNQ504T8 468 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 ARL13AQ5H913 290 aaPredicted RBP4.14□□□□□ -1.75
USP8-211ENST00000560527 SH2D4BQ5SQS7 431 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 RNF144BQ7Z419 303 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 IGFN1Q86VF2 1251 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 SRRM1Q8IYB3 904 aaKnown RBP4.14□□□□□ -1.75
USP8-211ENST00000560527 SCAIQ8N9R8 606 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 PCYOX1LQ8NBM8 494 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 SETD9Q8NE22 299 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 TNIP2Q8NFZ5 429 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 ST8SIA4Q92187 359 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 MPP4Q96JB8 637 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 QTRT1Q9BXR0 403 aaKnown RBP4.14□□□□□ -1.75
USP8-211ENST00000560527 MAF1Q9H063 256 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 RNF146Q9NTX7 359 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 TMEM45AQ9NWC5 275 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 BEX4Q9NWD9 120 aaPredicted RBP4.14□□□□□ -1.75
USP8-211ENST00000560527 HCN3Q9P1Z3 774 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 FBXO4Q9UKT5 387 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 DHDHQ9UQ10 334 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 LAMP3Q9UQV4 416 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 FRMD4BQ9Y2L6 1034 aa4.14□□□□□ -1.75
USP8-211ENST00000560527 SETD1BQ9UPS6 1966 aaKnown RBP4.14□□□□□ -1.75
USP8-211ENST00000560527 MST1RQ04912 1400 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 TCRBV7S3A2A0A539 114 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 CXorf65A6NEN9 183 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 FOXO6A8MYZ6 492 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 RHODO00212 210 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 EPB41L2O43491 1005 aaKnown RBP4.13□□□□□ -1.75
USP8-211ENST00000560527 TLX3O43711 291 aaPredicted RBP4.13□□□□□ -1.75
USP8-211ENST00000560527 PRR35P0CG20 571 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 ARL1P40616 181 aaPredicted RBP4.13□□□□□ -1.75
USP8-211ENST00000560527 SRSF1Q07955 248 aaKnown RBP eCLIP4.13□□□□□ -1.75
USP8-211ENST00000560527 SRSF4Q08170 494 aaKnown RBP4.13□□□□□ -1.75
USP8-211ENST00000560527 DDX10Q13206 875 aaKnown RBP4.13□□□□□ -1.75
USP8-211ENST00000560527 G3BP1Q13283 466 aaKnown RBP eCLIP4.13□□□□□ -1.75
USP8-211ENST00000560527 IL13RA2Q14627 380 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 EZH2Q15910 746 aaKnown RBP4.13□□□□□ -1.75
USP8-211ENST00000560527 NFIL3Q16649 462 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 PRICKLE4Q2TBC4 344 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 AP5B1Q2VPB7 878 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 SUPT20HL1Q3ZLR7 823 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 MORN5Q5VZ52 161 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 TMEM268Q5VZI3 342 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 HEATR4Q86WZ0 1026 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 DDIASQ8IXT1 998 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 FAM185AQ8N0U4 392 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 SLC44A5Q8NCS7 719 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 RAB40AQ8WXH6 277 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 CNOT9Q92600 299 aaKnown RBP4.13□□□□□ -1.75
USP8-211ENST00000560527 KAT2AQ92830 837 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 COQ8BQ96D53 544 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 CLSTN3Q9BQT9 956 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 WDR83Q9BRX9 315 aaKnown RBP4.13□□□□□ -1.75
USP8-211ENST00000560527 IFT27Q9BW83 186 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 SLC26A6Q9BXS9 759 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 AGXT2Q9BYV1 514 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 INTS2Q9H0H0 1204 aaKnown RBP4.13□□□□□ -1.75
USP8-211ENST00000560527 MROH8Q9H579 483 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 ACAD9Q9H845 621 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 PREBQ9HCU5 417 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 NRIP3Q9NQ35 241 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 GRHL1Q9NZI5 618 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 HDAC6Q9UBN7 1215 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 SLC25A10Q9UBX3 287 aaPredicted RBP4.13□□□□□ -1.75
USP8-211ENST00000560527 CYP46A1Q9Y6A2 500 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 ZNF804BA4D1E1 1349 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 ZMYM2Q9UBW7 1377 aa4.13□□□□□ -1.75
USP8-211ENST00000560527 TRBV5-7A0A0A0MS05 114 aa4.12□□□□□ -1.75
USP8-211ENST00000560527 TEX22C9J3V5 150 aa4.12□□□□□ -1.75
USP8-211ENST00000560527 UGDHO60701 494 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms