RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 C3orf38Q5JPI3 329 aa10.8□□□□□ -0.68
CDC42BPB-207ENST00000560492 RABGAP1LQ5R372 815 aa10.8□□□□□ -0.68
CDC42BPB-207ENST00000560492 KRBA2Q6ZNG9 492 aa10.8□□□□□ -0.68
CDC42BPB-207ENST00000560492 Q6ZVU0 165 aa10.8□□□□□ -0.68
CDC42BPB-207ENST00000560492 LSMEM2Q8N112 164 aa10.8□□□□□ -0.68
CDC42BPB-207ENST00000560492 CCAR2Q8N163 923 aaKnown RBP10.8□□□□□ -0.68
CDC42BPB-207ENST00000560492 OR4C6Q8NH72 309 aa10.8□□□□□ -0.68
CDC42BPB-207ENST00000560492 KCTD12Q96CX2 325 aaKnown RBP10.8□□□□□ -0.68
CDC42BPB-207ENST00000560492 BTN2A3PQ96KV6 586 aa10.8□□□□□ -0.68
CDC42BPB-207ENST00000560492 HSFY1Q96LI6 401 aa10.8□□□□□ -0.68
CDC42BPB-207ENST00000560492 ZNF578Q96N58 590 aaPredicted RBP10.8□□□□□ -0.68
CDC42BPB-207ENST00000560492 TRIM62Q9BVG3 475 aa10.8□□□□□ -0.68
CDC42BPB-207ENST00000560492 FAM204AQ9H8W3 233 aa10.8□□□□□ -0.68
CDC42BPB-207ENST00000560492 FZD3Q9NPG1 666 aa10.8□□□□□ -0.68
CDC42BPB-207ENST00000560492 UCKL1Q9NWZ5 548 aa10.8□□□□□ -0.68
CDC42BPB-207ENST00000560492 HPSEQ9Y251 543 aa10.8□□□□□ -0.68
CDC42BPB-207ENST00000560492 MGAQ8IWI9 3026 aa10.8□□□□□ -0.68
CDC42BPB-207ENST00000560492 TENM4Q6N022 2769 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 ZNF462Q96JM2 2506 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 A0A1B0GVM2 712 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 KPNA3O00505 521 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 SLC16A3O15427 465 aaKnown RBP10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 OPA1O60313 960 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 PCDH8O95206 1070 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 KRT5P13647 590 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 DGKAP23743 735 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 RBMS1P29558 406 aaKnown RBP10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 AKT2P31751 481 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 ANP32AP39687 249 aaKnown RBP10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 DUSP3P51452 185 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 OXCT1P55809 520 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 KCNMA1Q12791 1236 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 CETN1Q12798 172 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 NNTQ13423 1086 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 SLC12A1Q13621 1099 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 CCDC40Q4G0X9 1142 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 PKDCCQ504Y2 493 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 ZNF542PQ5EBM4 170 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 AGBL4Q5VU57 503 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 SYPL2Q5VXT5 272 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 KANSL1Q7Z3B3 1105 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 PTAR1Q7Z6K3 402 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 TRIM69Q86WT6 500 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 FAM181AQ8N9Y4 354 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 MAPK15Q8TD08 544 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 RFFLQ8WZ73 363 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 ERCC4Q92889 916 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 CCDC114Q96M63 670 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 RPRD1AQ96P16 312 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 PPP1R9BQ96SB3 815 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 MUC3BQ9H195 1237 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 SYNDIG1Q9H7V2 258 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 THSD1Q9NS62 852 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 RMND1Q9NWS8 449 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 DNAJC28Q9NX36 388 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 ARHGAP20Q9P2F6 1191 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 VPS28Q9UK41 221 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 SARDHQ9UL12 918 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 COQ4Q9Y3A0 265 aa10.79□□□□□ -0.68
CDC42BPB-207ENST00000560492 A0A1W2PQU0 124 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 CPED1A4D0V7 1026 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 TCAF2A6NFQ2 919 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 NEMP2A6NFY4 417 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 TRUB2O95900 331 aaKnown RBP10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 PRCPP42785 496 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 ACADSBP45954 432 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 FKBP3Q00688 224 aaKnown RBP10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 CENPCQ03188 943 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 CCDC15Q0P6D6 951 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 DLG2Q15700 870 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 TTC39BQ5VTQ0 682 aaPredicted RBP10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 RRAGAQ7L523 313 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 PRICKLE2Q7Z3G6 844 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 CACTIN-AS1Q8N1I8 211 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 SLC25A45Q8N413 288 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 OR13H1Q8NG92 308 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 KAT5Q92993 513 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 SLC39A13Q96H72 371 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 VCPIP1Q96JH7 1222 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 APOLD1Q96LR9 279 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 CLMPQ9H6B4 373 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 POLR1BQ9H9Y6 1135 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 PREBQ9HCU5 417 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 IPO11Q9UI26 975 aaKnown RBP10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 TRPM6Q9BX84 2022 aa10.78□□□□□ -0.68
CDC42BPB-207ENST00000560492 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 TRIM49BA6NDI0 452 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 KCNU1A8MYU2 1149 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 RNF225M0QZC1 329 aaPredicted RBP10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 SLC28A2O43868 658 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 PIAS2O75928 621 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 NEBLO76041 1014 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 ZNF202O95125 648 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 FYNP06241 537 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 CKMT1AP12532 417 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 HNRNPA2B1P22626 353 aaKnown RBP10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 GGCXP38435 758 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 FMO5P49326 533 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 CLDN2P57739 230 aa10.77□□□□□ -0.69
CDC42BPB-207ENST00000560492 CDK17Q00537 523 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms