RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 CACNA2D2Q9NY47 1150 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 TRIM10Q9UDY6 481 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 SCML1Q9UN30 329 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 TFR2Q9UP52 801 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 SNX10Q9Y5X0 201 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 ATG2BQ96BY7 2078 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 CKAP5Q14008 2032 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 CHD5Q8TDI0 1954 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 EDDM13A0A1B0GTR0 161 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 AXIN1O15169 862 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 SERPINB6P35237 376 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 SSR1P43307 286 aaKnown RBP14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 NOP2P46087 812 aaKnown RBP14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 POLD3Q15054 466 aaPredicted RBP14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 PPP6R3Q5H9R7 873 aaPredicted RBP14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 ZNF569Q5MCW4 686 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 TMEM92Q6UXU6 159 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 KIAA1328Q86T90 577 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 OR2T3Q8NH03 318 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 ATOH1Q92858 354 aaPredicted RBP14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 MYO19Q96H55 970 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 MRGPRX3Q96LB0 322 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 ACOX2Q99424 681 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 CEP44Q9C0F1 390 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 ATP13A1Q9HD20 1204 aa14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 DDX56Q9NY93 547 aaKnown RBP14.32□□□□□ -0.12
PKNOX1-209ENST00000560448 FANCMQ8IYD8 2048 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 TCRBV21S2A2A0A5A6 115 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 PROB1E7EW31 1015 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 ALOX15BO15296 676 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 PSTPIP1O43586 416 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 ATP9BO43861 1147 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 RNASEH1O60930 286 aaKnown RBP14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 DPYSQ14117 519 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 KRT81Q14533 505 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 ELAVL3Q14576 367 aaKnown RBP14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 SMTNL2Q2TAL5 461 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 USP39Q53GS9 565 aaKnown RBP14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 KCNT1Q5JUK3 1230 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 IL31Q6EBC2 164 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 ANO7Q6IWH7 933 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 LRRC49Q8IUZ0 686 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 RHOT1Q8IXI2 618 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 SLC35F6Q8N357 371 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 MDGA1Q8NFP4 955 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 OR52K2Q8NGK3 314 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 CYB5D2Q8WUJ1 264 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 SORCS1Q8WY21 1168 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 HSPH1Q92598 858 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 ARHGEF2Q92974 986 aaKnown RBP14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 SPACA7Q96KW9 195 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 HHIPQ96QV1 700 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 KCTD15Q96SI1 283 aaPredicted RBP14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 CWC15Q9P013 229 aaKnown RBP14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 BCCIPQ9P287 314 aaKnown RBP eCLIP14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 VPS51Q9UID3 782 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 GUCA1BQ9UMX6 200 aa14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 FARP1Q9Y4F1 1045 aaPredicted RBP14.31□□□□□ -0.12
PKNOX1-209ENST00000560448 A0A0D9SEW6 157 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 ARHGAP42A6NI28 874 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 KRT86O43790 486 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 SPOPO43791 374 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 URI1O94763 535 aaPredicted RBP14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 SLU7O95391 586 aaKnown RBP14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 GOT1P17174 413 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 ERCC2P18074 760 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 PRKCHP24723 683 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 CDH6P55285 790 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 CA9Q16790 459 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 INO80DQ53TQ3 878 aaPredicted RBP14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 ODF2Q5BJF6 829 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 SPDYCQ5MJ68 293 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 TMCO4Q5TGY1 634 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 TSSK4Q6SA08 328 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 TMCO3Q6UWJ1 677 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 DSG4Q86SJ6 1040 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 PLPP6Q8IY26 295 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 SYCE1Q8N0S2 351 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 SH2D3CQ8N5H7 860 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 RNF10Q8N5U6 811 aaKnown RBP14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 GAB3Q8WWW8 586 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 ISG20Q96AZ6 181 aaKnown RBP14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 CSPG4P5Q96PW8 444 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 PSMB7Q99436 277 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 EPC1Q9H2F5 836 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 PCDH18Q9HCL0 1135 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 GPATCH2LQ9NWQ4 482 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 C2orf42Q9NWW7 574 aa14.3□□□□□ -0.12
PKNOX1-209ENST00000560448 CACNA1HO95180 2353 aa14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 WASH3PC4AMC7 463 aa14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 CBX4O00257 560 aa14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 KDELR3O43731 214 aa14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 BUB1BO60566 1050 aaPredicted RBP14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 GABRG2P18507 467 aa14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 SERPINH1P50454 418 aaKnown RBP14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 ARSEP51690 589 aa14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 NHLH1Q02575 133 aa14.29□□□□□ -0.12
PKNOX1-209ENST00000560448 ATP11CQ8NB49 1132 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms