RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 INTS6Q9UL03 887 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 SCML1Q9UN30 329 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 HCN4Q9Y3Q4 1203 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 STON1Q9Y6Q2 735 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 DUSP10Q9Y6W6 482 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 PLXND1Q9Y4D7 1925 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 SHROOM3Q8TF72 1996 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 FAM86C2PA6NEL3 165 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 DCLK1O15075 740 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 TRIM24O15164 1050 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 ALOX15BO15296 676 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 ATP9BO43861 1147 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 APBB3O95704 486 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 KRT1P04264 644 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 MZF1P28698 734 aaPredicted RBP12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 NR2C2P49116 596 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 SEC13P55735 322 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 CCDC15Q0P6D6 951 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 SERINC3Q13530 473 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 PAFAH1B3Q15102 231 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 PPP2R5EQ16537 467 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 HNRNPA1L2Q32P51 320 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 TFDP3Q5H9I0 405 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 ARTNQ5T4W7 220 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 EGFLAMQ63HQ2 1017 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 TMEM215Q68D42 235 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 NAIF1Q69YI7 327 aaPredicted RBP12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 ZC3H14Q6PJT7 736 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 NT5DC3Q86UY8 548 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 CIR1Q86X95 450 aaPredicted RBP12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 APCDD1Q8J025 514 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 BBS5Q8N3I7 341 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 NSMCE1Q8WV22 266 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 FATE1Q969F0 183 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 P2RY11Q96G91 374 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 RNF157Q96PX1 679 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 SPON2Q9BUD6 331 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 LRRC19Q9H756 370 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 GPATCH2LQ9NWQ4 482 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 SALL4Q9UJQ4 1053 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 SNX10Q9Y5X0 201 aa12.33□□□□□ -0.44
RABGGTA-215ENST00000560207 GRID2IPA4D2P6 1211 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 RASA4BC9J798 803 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 CBX4O00257 560 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 RASA4O43374 803 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 PALMO75781 387 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 EPHX1P07099 455 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 TCF4P15884 667 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 IL4RP24394 825 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 PTPN7P35236 360 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 GJC1P36383 396 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 HSPA9P38646 679 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 RECQLP46063 649 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 RENBPP51606 427 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 IRAK1P51617 712 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 IL10RBQ08334 325 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 MESP2Q0VG99 397 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 CAMK2GQ13555 558 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 ELAVL3Q14576 367 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 GRM3Q14832 879 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 TAZQ16635 292 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 PTPRNQ16849 979 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 DAB2IPQ5VWQ8 1189 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 AFMIDQ63HM1 303 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 TXNRD3NBQ6F5E7 133 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 TIGD7Q6NT04 549 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 Q6ZS52 159 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 ZNF354CQ86Y25 554 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 SH2D3CQ8N5H7 860 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 PCDH20Q8N6Y1 951 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 TSTD1Q8NFU3 115 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 LRIG1Q96JA1 1093 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 FERMT1Q9BQL6 677 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 LZTFL1Q9NQ48 299 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 AMACRQ9UHK6 382 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 VPS51Q9UID3 782 aa12.32□□□□□ -0.44
RABGGTA-215ENST00000560207 A0A0D9SEW6 157 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 SGK1O00141 431 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 APOL1O14791 398 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 KIF5CO60282 957 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 ZNF217O75362 1048 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 CHRM1P11229 460 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 TGM2P21980 687 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 AMPD1P23109 780 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 IL12RB1P42701 662 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 MAPK8P45983 427 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 SERPINH1P50454 418 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 PTPN5P54829 565 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 RAD51Q06609 339 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 GAS6Q14393 721 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 ANGPT1Q15389 498 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 HS1BP3Q53T59 392 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 EMC10Q5UCC4 262 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 FAM46CQ5VWP2 391 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 SLC9A4Q6AI14 798 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 LONP2Q86WA8 852 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 CCDC50Q8IVM0 306 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 CCDC33Q8N5R6 958 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 ATP11CQ8NB49 1132 aa12.31□□□□□ -0.44
RABGGTA-215ENST00000560207 OR2T3Q8NH03 318 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms