RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 ALOX15BO15296 676 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 RNASEH1O60930 286 aaKnown RBP13.54□□□□□ -0.24
SMAD3-213ENST00000560175 CD160O95971 181 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 MT-CO1P00395 513 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 DNTTP04053 509 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 MYBL1P10243 752 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 SRCP12931 536 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 VAV1P15498 845 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 MAPKAPK2P49137 400 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 CLCN6P51797 869 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 FOXK2Q01167 660 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 ZNF252P-AS1Q0IIN9 211 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 SFSWAPQ12872 951 aaKnown RBP13.54□□□□□ -0.24
SMAD3-213ENST00000560175 DLG2Q15700 870 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 AASDHQ4L235 1098 aaPredicted RBP13.54□□□□□ -0.24
SMAD3-213ENST00000560175 SYCP2LQ5T4T6 812 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 STPG1Q5TH74 334 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 DCUN1D2Q6PH85 259 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 ARMCX6Q7L4S7 300 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 STK40Q8N2I9 435 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 DEFB119Q8N690 84 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 HSPA12BQ96MM6 686 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 BTBD1Q9H0C5 482 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 MUC3BQ9H195 1237 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 TSPY26PQ9H489 355 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 OSGEPQ9NPF4 335 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 NDFIP2Q9NV92 336 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 VPS51Q9UID3 782 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 SLC25A13Q9UJS0 675 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 PPM1HQ9ULR3 514 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 FZD4Q9ULV1 537 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 SLC6A14Q9UN76 642 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.54□□□□□ -0.24
SMAD3-213ENST00000560175 KNL1Q8NG31 2342 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 ANKRD62A6NC57 917 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 TMCO5BA8MYB1 307 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 EIF3CLB5ME19 914 aaKnown RBP13.53□□□□□ -0.24
SMAD3-213ENST00000560175 SNAP91O60641 907 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 ZNF821O75541 412 aaPredicted RBP13.53□□□□□ -0.24
SMAD3-213ENST00000560175 ADH1BP00325 375 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 C5AR1P21730 350 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 SLC8A1P32418 973 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 HTR7P34969 479 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 GNA12Q03113 381 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 ACAP1Q15027 740 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 TTC31Q49AM3 519 aaPredicted RBP13.53□□□□□ -0.24
SMAD3-213ENST00000560175 TRIM61Q5EBN2 209 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 WDR45BQ5MNZ6 344 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 CYP4V2Q6ZWL3 525 aaPredicted RBP13.53□□□□□ -0.24
SMAD3-213ENST00000560175 TMC6Q7Z403 805 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 TFAP2DQ7Z6R9 452 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 DNAAF5Q86Y56 855 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 MMAAQ8IVH4 418 aaKnown RBP13.53□□□□□ -0.24
SMAD3-213ENST00000560175 PLPP6Q8IY26 295 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 OR7D4Q8NG98 312 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 ARHGEF2Q92974 986 aaKnown RBP13.53□□□□□ -0.24
SMAD3-213ENST00000560175 TRIM11Q96F44 468 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 EIF3CQ99613 913 aaKnown RBP13.53□□□□□ -0.24
SMAD3-213ENST00000560175 ORAI3Q9BRQ5 295 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 MAGEH1Q9H213 219 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 FBXL12Q9NXK8 326 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 ARHGAP20Q9P2F6 1191 aa13.53□□□□□ -0.24
SMAD3-213ENST00000560175 CNOT8Q9UFF9 292 aaKnown RBP13.53□□□□□ -0.24
SMAD3-213ENST00000560175 A0A087X0T9 212 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 MID1O15344 667 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 SMAD6O43541 496 aaKnown RBP13.52□□□□□ -0.25
SMAD3-213ENST00000560175 SEMA4FO95754 770 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 TPM3P06753 285 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 FAM228BP0C875 321 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 GOT1P17174 413 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 CASP14P31944 242 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 DRD3P35462 400 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 ETFBP38117 255 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 GALCP54803 685 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 ARF5P84085 180 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 ASTE1Q2TB18 679 aaPredicted RBP13.52□□□□□ -0.25
SMAD3-213ENST00000560175 DCAF12L1Q5VU92 463 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 SPECC1LQ69YQ0 1117 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 PSTKQ8IV42 348 aaKnown RBP13.52□□□□□ -0.25
SMAD3-213ENST00000560175 PYROXD2Q8N2H3 581 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 AADATQ8N5Z0 425 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 OR2A12Q8NGT7 310 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 CPLX3Q8WVH0 158 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 ISG20Q96AZ6 181 aaKnown RBP13.52□□□□□ -0.25
SMAD3-213ENST00000560175 TBC1D31Q96DN5 1066 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 DNAJC7Q99615 494 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 NCAPGQ9BPX3 1015 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 EDEM2Q9BV94 578 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 NUSAP1Q9BXS6 441 aaKnown RBP13.52□□□□□ -0.25
SMAD3-213ENST00000560175 TRIM7Q9C029 511 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 CEP44Q9C0F1 390 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 NEUROG2Q9H2A3 272 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 KDM4CQ9H3R0 1056 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 C6orf106Q9H6K1 298 aaPredicted RBP13.52□□□□□ -0.25
SMAD3-213ENST00000560175 NOL6Q9H6R4 1146 aaKnown RBP13.52□□□□□ -0.25
SMAD3-213ENST00000560175 MRPL47Q9HD33 250 aaKnown RBP13.52□□□□□ -0.25
SMAD3-213ENST00000560175 SERGEFQ9UGK8 458 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 SUSD2Q9UGT4 822 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 SARDHQ9UL12 918 aa13.52□□□□□ -0.25
SMAD3-213ENST00000560175 NCKAP1Q9Y2A7 1128 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms