RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 ARF5P84085 180 aa17.23■□□□□ 0.35
RPL28-209ENST00000560055 FRS2Q8WU20 508 aa17.23■□□□□ 0.35
RPL28-209ENST00000560055 MRGPRX1Q96LB2 322 aa17.23■□□□□ 0.35
RPL28-209ENST00000560055 LACRTQ9GZZ8 138 aa17.23■□□□□ 0.35
RPL28-209ENST00000560055 KLC2Q9H0B6 622 aa17.23■□□□□ 0.35
RPL28-209ENST00000560055 ATP13A1Q9HD20 1204 aa17.23■□□□□ 0.35
RPL28-209ENST00000560055 PRSS16Q9NQE7 514 aa17.23■□□□□ 0.35
RPL28-209ENST00000560055 DONSONQ9NYP3 566 aa17.23■□□□□ 0.35
RPL28-209ENST00000560055 SUN2Q9UH99 717 aa17.23■□□□□ 0.35
RPL28-209ENST00000560055 TTC34A8MYJ7 566 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 H3BRJ5 948 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 HRO43593 1189 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 SYNCRIPO60506 623 aaKnown RBP17.22■□□□□ 0.35
RPL28-209ENST00000560055 BUB1BO60566 1050 aaPredicted RBP17.22■□□□□ 0.35
RPL28-209ENST00000560055 MT-CO1P00395 513 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 ERCC2P18074 760 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 IL4RP24394 825 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 CNR2P34972 360 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 SLC1A1P43005 524 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 SSR1P43307 286 aaKnown RBP17.22■□□□□ 0.35
RPL28-209ENST00000560055 YBEYP58557 167 aaPredicted RBP17.22■□□□□ 0.35
RPL28-209ENST00000560055 POLD3Q15054 466 aaPredicted RBP17.22■□□□□ 0.35
RPL28-209ENST00000560055 ATP13A4Q4VNC1 1196 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 C9orf64Q5T6V5 341 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 AFMIDQ63HM1 303 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 LRRC8AQ8IWT6 810 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 SH2D3CQ8N5H7 860 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 CCDC112Q8NEF3 446 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 ERLEC1Q96DZ1 483 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 CSPG4P5Q96PW8 444 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 DESI2Q9BSY9 194 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 SPON2Q9BUD6 331 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 TPSD1Q9BZJ3 242 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 SLC6A17Q9H1V8 727 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 MTG2Q9H4K7 406 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 LRRC19Q9H756 370 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 FBRSQ9HAH7 460 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 RCOR3Q9P2K3 495 aaPredicted RBP17.22■□□□□ 0.35
RPL28-209ENST00000560055 SLC25A13Q9UJS0 675 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 DUSP10Q9Y6W6 482 aa17.22■□□□□ 0.35
RPL28-209ENST00000560055 EML5Q05BV3 1969 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 EDDM13A0A1B0GTR0 161 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 TARSL2A2RTX5 802 aaKnown RBP17.21■□□□□ 0.35
RPL28-209ENST00000560055 DCLK1O15075 740 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 SIN3BO75182 1162 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 CD160O95971 181 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 CD48P09326 243 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 SRCP12931 536 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 ARL4AP40617 200 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 NOP2P46087 812 aaKnown RBP17.21■□□□□ 0.35
RPL28-209ENST00000560055 CLCN6P51797 869 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 NDST2P52849 883 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 CDH6P55285 790 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 SRSF5Q13243 272 aaKnown RBP17.21■□□□□ 0.35
RPL28-209ENST00000560055 DPYSL3Q14195 570 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 PARP15Q460N3 678 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 LRRC38Q5VT99 294 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 C11orf63Q6NUN7 778 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 TMPRSS6Q8IU80 811 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 NPWQ8N729 165 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 OR2T3Q8NH03 318 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 GAB3Q8WWW8 586 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 PTPRN2Q92932 1015 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 HMCESQ96FZ2 354 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 EPC1Q9H2F5 836 aa17.21■□□□□ 0.35
RPL28-209ENST00000560055 BCCIPQ9P287 314 aaKnown RBP eCLIP17.21■□□□□ 0.35
RPL28-209ENST00000560055 RASA4BC9J798 803 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 CBX4O00257 560 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 ARHGAP6O43182 974 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 RASA4O43374 803 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 VAV1P15498 845 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 COMTP21964 271 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 NNMTP40261 264 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 SLC20A2Q08357 652 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 MAP7D1Q3KQU3 841 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 IL31Q6EBC2 164 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 RETSATQ6NUM9 610 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 LINGO4Q6UY18 593 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 METTL3Q86U44 580 aaKnown RBP17.2■□□□□ 0.34
RPL28-209ENST00000560055 ARHGAP12Q8IWW6 846 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 TPCN2Q8NHX9 752 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 FAF2Q96CS3 445 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 CALR3Q96L12 384 aaKnown RBP17.2■□□□□ 0.34
RPL28-209ENST00000560055 ZNF670Q9BS34 389 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 RSPH9Q9H1X1 276 aaPredicted RBP17.2■□□□□ 0.34
RPL28-209ENST00000560055 SEMA4AQ9H3S1 761 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 GOLPH3Q9H4A6 298 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 PRDM16Q9HAZ2 1276 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 ETNK2Q9NVF9 386 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 KLHL11Q9NVR0 708 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 MFHAS1Q9Y4C4 1052 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 HYOU1Q9Y4L1 999 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 ALG6Q9Y672 507 aa17.2■□□□□ 0.34
RPL28-209ENST00000560055 A0A0U1RQJ8 604 aa17.19■□□□□ 0.34
RPL28-209ENST00000560055 K7ERQ8 282 aa17.19■□□□□ 0.34
RPL28-209ENST00000560055 ZBTB24O43167 697 aaPredicted RBP17.19■□□□□ 0.34
RPL28-209ENST00000560055 DAPK3O43293 454 aa17.19■□□□□ 0.34
RPL28-209ENST00000560055 SMAD6O43541 496 aaKnown RBP17.19■□□□□ 0.34
RPL28-209ENST00000560055 KDELR3O43731 214 aa17.19■□□□□ 0.34
RPL28-209ENST00000560055 ZNF821O75541 412 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms