RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 RHOCP08134 193 aa18.2■□□□□ 0.5
HDDC3-205ENST00000559898 UNGP13051 313 aaPredicted RBP18.2■□□□□ 0.5
HDDC3-205ENST00000559898 MMP8P22894 467 aa18.2■□□□□ 0.5
HDDC3-205ENST00000559898 AFF3P51826 1226 aaKnown RBP18.2■□□□□ 0.5
HDDC3-205ENST00000559898 SNX16P57768 344 aa18.2■□□□□ 0.5
HDDC3-205ENST00000559898 CCDC14Q49A88 953 aa18.2■□□□□ 0.5
HDDC3-205ENST00000559898 FAM72AQ5TYM5 149 aa18.2■□□□□ 0.5
HDDC3-205ENST00000559898 FAM72DQ6L9T8 149 aa18.2■□□□□ 0.5
HDDC3-205ENST00000559898 SASS6Q6UVJ0 657 aa18.2■□□□□ 0.5
HDDC3-205ENST00000559898 FAM72BQ86X60 149 aa18.2■□□□□ 0.5
HDDC3-205ENST00000559898 MARCH9Q86YJ5 346 aa18.2■□□□□ 0.5
HDDC3-205ENST00000559898 AOPEPQ8N6M6 819 aa18.2■□□□□ 0.5
HDDC3-205ENST00000559898 CHST14Q8NCH0 376 aa18.2■□□□□ 0.5
HDDC3-205ENST00000559898 RXFP2Q8WXD0 754 aa18.2■□□□□ 0.5
HDDC3-205ENST00000559898 GATA6Q92908 595 aa18.2■□□□□ 0.5
HDDC3-205ENST00000559898 GBP4Q96PP9 640 aa18.2■□□□□ 0.5
HDDC3-205ENST00000559898 ZDHHC5Q9C0B5 715 aa18.2■□□□□ 0.5
HDDC3-205ENST00000559898 MUC3BQ9H195 1237 aa18.2■□□□□ 0.5
HDDC3-205ENST00000559898 RRN3Q9NYV6 651 aa18.2■□□□□ 0.5
HDDC3-205ENST00000559898 LGALS16A8MUM7 142 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 TEX33O43247 280 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 ENDOD1O94919 500 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 GOT1P17174 413 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 C5AR1P21730 350 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 CTSKP43235 329 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 MYL5Q02045 173 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 SULT2A1Q06520 285 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 CNTN1Q12860 1018 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 SLC14A1Q13336 389 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 ELAVL3Q14576 367 aaKnown RBP18.19■□□□□ 0.5
HDDC3-205ENST00000559898 STX1AQ16623 288 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 SMYD5Q6GMV2 418 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 UNQ6494/PRO21346Q6UXR6 183 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 SND1Q7KZF4 910 aaKnown RBP eCLIP18.19■□□□□ 0.5
HDDC3-205ENST00000559898 DNAAF5Q86Y56 855 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 OR2T34Q8NGX1 318 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 BAHD1Q8TBE0 780 aaPredicted RBP18.19■□□□□ 0.5
HDDC3-205ENST00000559898 SETD7Q8WTS6 366 aaKnown RBP18.19■□□□□ 0.5
HDDC3-205ENST00000559898 ARRDC3Q96B67 414 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 TNKS2Q9H2K2 1166 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 ANO10Q9NW15 660 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 SLC25A13Q9UJS0 675 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 PPM1HQ9ULR3 514 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 SCML1Q9UN30 329 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 NEU3Q9UQ49 428 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 CA5BQ9Y2D0 317 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 CHD5Q8TDI0 1954 aa18.19■□□□□ 0.5
HDDC3-205ENST00000559898 CABIN1Q9Y6J0 2220 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 A0A1W2PR77 199 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 ZNF821O75541 412 aaPredicted RBP18.18■□□□□ 0.5
HDDC3-205ENST00000559898 CER1O95813 267 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 ADH1BP00325 375 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 FTH1P19P0C7X4 201 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 MAT2AP31153 395 aaKnown RBP18.18■□□□□ 0.5
HDDC3-205ENST00000559898 RDXP35241 583 aaKnown RBP18.18■□□□□ 0.5
HDDC3-205ENST00000559898 GRIA4P48058 902 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 TAS2R38P59533 333 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 UBXN1Q04323 297 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 TYRO3Q06418 890 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 SHBQ15464 509 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 FKBP15Q5T1M5 1219 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 AGBL4Q5VU57 503 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 DBX2Q6ZNG2 339 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 CCDC185Q8N715 623 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 PIP4K2CQ8TBX8 421 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 FAM131CQ96AQ9 280 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 SPAG5Q96R06 1193 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 OSGEPQ9NPF4 335 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 TOR4AQ9NXH8 423 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 ARHGAP20Q9P2F6 1191 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 RALYQ9UKM9 306 aaKnown RBP18.18■□□□□ 0.5
HDDC3-205ENST00000559898 FZD4Q9ULV1 537 aa18.18■□□□□ 0.5
HDDC3-205ENST00000559898 C2CD4BA6NLJ0 364 aa18.17■□□□□ 0.5
HDDC3-205ENST00000559898 ZMPSTE24O75844 475 aa18.17■□□□□ 0.5
HDDC3-205ENST00000559898 CD160O95971 181 aa18.17■□□□□ 0.5
HDDC3-205ENST00000559898 ATXN1LP0C7T5 689 aaKnown RBP18.17■□□□□ 0.5
HDDC3-205ENST00000559898 ACVRL1P37023 503 aa18.17■□□□□ 0.5
HDDC3-205ENST00000559898 NNMTP40261 264 aa18.17■□□□□ 0.5
HDDC3-205ENST00000559898 STAT1P42224 750 aa18.17■□□□□ 0.5
HDDC3-205ENST00000559898 VASPP50552 380 aaPredicted RBP18.17■□□□□ 0.5
HDDC3-205ENST00000559898 CLEC16AQ2KHT3 1053 aa18.17■□□□□ 0.5
HDDC3-205ENST00000559898 RAB44Q7Z6P3 723 aaPredicted RBP18.17■□□□□ 0.5
HDDC3-205ENST00000559898 ZNF677Q86XU0 584 aa18.17■□□□□ 0.5
HDDC3-205ENST00000559898 GATAD2AQ86YP4 633 aa18.17■□□□□ 0.5
HDDC3-205ENST00000559898 DRC7Q8IY82 874 aa18.17■□□□□ 0.5
HDDC3-205ENST00000559898 OR2A12Q8NGT7 310 aa18.17■□□□□ 0.5
HDDC3-205ENST00000559898 OR8D1Q8WZ84 308 aa18.17■□□□□ 0.5
HDDC3-205ENST00000559898 C1orf74Q96LT6 269 aa18.17■□□□□ 0.5
HDDC3-205ENST00000559898 PCMTD1Q96MG8 357 aaPredicted RBP18.17■□□□□ 0.5
HDDC3-205ENST00000559898 HS3ST2Q9Y278 367 aa18.17■□□□□ 0.5
HDDC3-205ENST00000559898 TBC1D3DA0A087WVF3 549 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 TBC1D3IA0A087WXS9 549 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 TBC1D3EA0A087X179 549 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 TBC1D3KA0A087X1G2 549 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 TBC1D3FA6NER0 549 aaPredicted RBP18.16■□□□□ 0.5
HDDC3-205ENST00000559898 LRRC72A6NJI9 287 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 GOLGA8CPA6NN73 597 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 TBC1D3LB9A6J9 549 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 CBX4O00257 560 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 MCF2LO15068 1137 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms