RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 TCP11X1B4DZS4 312 aa18.2■□□□□ 0.5
SNX1-208ENST00000559844 TYROBPO43914 113 aa18.2■□□□□ 0.5
SNX1-208ENST00000559844 SRGAP2BP0DMP2 458 aa18.2■□□□□ 0.5
SNX1-208ENST00000559844 CA4P22748 312 aa18.2■□□□□ 0.5
SNX1-208ENST00000559844 EPHB3P54753 998 aa18.2■□□□□ 0.5
SNX1-208ENST00000559844 ZNF33AQ06730 810 aa18.2■□□□□ 0.5
SNX1-208ENST00000559844 PLD1Q13393 1074 aa18.2■□□□□ 0.5
SNX1-208ENST00000559844 ITIH4Q14624 930 aa18.2■□□□□ 0.5
SNX1-208ENST00000559844 PPP2R5DQ14738 602 aa18.2■□□□□ 0.5
SNX1-208ENST00000559844 VEPH1Q14D04 833 aa18.2■□□□□ 0.5
SNX1-208ENST00000559844 CYS1Q717R9 158 aa18.2■□□□□ 0.5
SNX1-208ENST00000559844 PID1Q7Z2X4 250 aa18.2■□□□□ 0.5
SNX1-208ENST00000559844 MON1AQ86VX9 555 aa18.2■□□□□ 0.5
SNX1-208ENST00000559844 MLXIPLQ9NP71 852 aa18.2■□□□□ 0.5
SNX1-208ENST00000559844 KLHL8Q9P2G9 620 aaPredicted RBP18.2■□□□□ 0.5
SNX1-208ENST00000559844 TRHDEQ9UKU6 1024 aa18.2■□□□□ 0.5
SNX1-208ENST00000559844 EYSQ5T1H1 3165 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 ASMTLO95671 621 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 MT-ND3P03897 115 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 KRT4P19013 534 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 PTPN3P26045 913 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 PSMB4P28070 264 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 FAM182AQ5T1J6 154 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 UNC5AQ6ZN44 842 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 EP400NLQ6ZTU2 488 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 SCD5Q86SK9 330 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 LRRC6Q86X45 466 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 OTUD6BQ8N6M0 293 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 PDCD7Q8N8D1 485 aaKnown RBP18.19■□□□□ 0.5
SNX1-208ENST00000559844 SPATA17Q96L03 361 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 SERPINB11Q96P15 392 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 KIF9Q9HAQ2 790 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 SDR42E2A6NKP2 422 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 CCL16O15467 120 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 FGF10O15520 208 aaPredicted RBP18.19■□□□□ 0.5
SNX1-208ENST00000559844 GARSP41250 739 aaKnown RBP18.19■□□□□ 0.5
SNX1-208ENST00000559844 ADAM15Q13444 863 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 TTC39BQ5VTQ0 682 aaPredicted RBP18.19■□□□□ 0.5
SNX1-208ENST00000559844 NUGGCQ68CJ6 796 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 ITPRIPL1Q6GPH6 555 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 TMEM184AQ6ZMB5 413 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 RTL10Q7L3V2 364 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 CNPY4Q8N129 248 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 NPWQ8N729 165 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 STAMBPL1Q96FJ0 436 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 NAT9Q9BTE0 207 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 CATSPERBQ9H7T0 1116 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 DZANK1Q9NVP4 752 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 CLDND1Q9NY35 253 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 SNX10Q9Y5X0 201 aa18.19■□□□□ 0.5
SNX1-208ENST00000559844 A0A1W2PQH9 124 aa18.18■□□□□ 0.5
SNX1-208ENST00000559844 SLC38A8A6NNN8 435 aa18.18■□□□□ 0.5
SNX1-208ENST00000559844 TM9SF1O15321 606 aa18.18■□□□□ 0.5
SNX1-208ENST00000559844 C1QAP02745 245 aa18.18■□□□□ 0.5
SNX1-208ENST00000559844 HOXA9P31269 272 aa18.18■□□□□ 0.5
SNX1-208ENST00000559844 WDR4P57081 412 aaKnown RBP18.18■□□□□ 0.5
SNX1-208ENST00000559844 IFT88Q13099 833 aa18.18■□□□□ 0.5
SNX1-208ENST00000559844 CCDC85BQ15834 202 aaPredicted RBP18.18■□□□□ 0.5
SNX1-208ENST00000559844 CTAGE3PQ8IX95 158 aa18.18■□□□□ 0.5
SNX1-208ENST00000559844 LZTR1Q8N653 840 aa18.18■□□□□ 0.5
SNX1-208ENST00000559844 C12orf76Q8N812 135 aaPredicted RBP18.18■□□□□ 0.5
SNX1-208ENST00000559844 NETO2Q8NC67 525 aa18.18■□□□□ 0.5
SNX1-208ENST00000559844 ELAC2Q9BQ52 826 aaKnown RBP18.18■□□□□ 0.5
SNX1-208ENST00000559844 SFXN1Q9H9B4 322 aa18.18■□□□□ 0.5
SNX1-208ENST00000559844 ZDHHC7Q9NXF8 308 aa18.18■□□□□ 0.5
SNX1-208ENST00000559844 MAGED2Q9UNF1 606 aaPredicted RBP18.18■□□□□ 0.5
SNX1-208ENST00000559844 CCDC195A0A1B0GUA6 201 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 ERI2A8K979 691 aaKnown RBP18.17■□□□□ 0.5
SNX1-208ENST00000559844 MYO1CO00159 1063 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 KRT37O76014 449 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 HNRNPA1P09651 372 aaKnown RBP eCLIP18.17■□□□□ 0.5
SNX1-208ENST00000559844 HOXC13P31276 330 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 RPA3P35244 121 aaPredicted RBP18.17■□□□□ 0.5
SNX1-208ENST00000559844 SEPT7Q16181 437 aaKnown RBP18.17■□□□□ 0.5
SNX1-208ENST00000559844 TAF12Q16514 161 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 HHATQ5VTY9 493 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 STEAP4Q687X5 459 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 MSANTD2Q6P1R3 559 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 PRPF39Q86UA1 669 aaKnown RBP18.17■□□□□ 0.5
SNX1-208ENST00000559844 TP53INP2Q8IXH6 220 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 ELMOD1Q8N336 334 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 PPM1NQ8N819 430 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 GRAMD1AQ96CP6 724 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 TBC1D31Q96DN5 1066 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 CEP295NLQ96MC4 621 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 PAIP2Q9BPZ3 127 aaKnown RBP18.17■□□□□ 0.5
SNX1-208ENST00000559844 OBSL1O75147 1896 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 FAM159BA6NKW6 160 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 KCNK1O00180 336 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 PAGE1O75459 146 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 FAM155BO75949 473 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 SLC2A3P11169 496 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 GRIA1P42261 906 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 USP46P62068 366 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 NRG1Q02297 640 aaPredicted RBP18.17■□□□□ 0.5
SNX1-208ENST00000559844 RWDD4Q6NW29 188 aaKnown RBP18.17■□□□□ 0.5
SNX1-208ENST00000559844 TMC5Q6UXY8 1006 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 RGS9BPQ6ZS82 235 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 CCDC121Q6ZUS5 278 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 DNAJB7Q7Z6W7 309 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms