RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 MMS22LQ6ZRQ5 1243 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 TTC39CQ8N584 583 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 WFIKKN2Q8TEU8 576 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 TTC17Q96AE7 1141 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 TMA16Q96EY4 203 aaKnown RBP6.02□□□□□ -1.45
USP3-215ENST00000559771 SLC39A13Q96H72 371 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 FCRL2Q96LA5 508 aaPredicted RBP6.02□□□□□ -1.45
USP3-215ENST00000559771 BBC3Q96PG8 261 aaPredicted RBP6.02□□□□□ -1.45
USP3-215ENST00000559771 PCED1AQ9H1Q7 454 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 RSPH9Q9H1X1 276 aaPredicted RBP6.02□□□□□ -1.45
USP3-215ENST00000559771 LHX5Q9H2C1 402 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 GRPEL1Q9HAV7 217 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 CNGB3Q9NQW8 809 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 ABCC13Q9NSE7 274 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 OLA1Q9NTK5 396 aaKnown RBP6.02□□□□□ -1.45
USP3-215ENST00000559771 LMBRD1Q9NUN5 540 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 XPO7Q9UIA9 1087 aaKnown RBP6.02□□□□□ -1.45
USP3-215ENST00000559771 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.02□□□□□ -1.45
USP3-215ENST00000559771 ANKRD6Q9Y2G4 727 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 RAXQ9Y2V3 346 aa6.02□□□□□ -1.45
USP3-215ENST00000559771 GCN1Q92616 2671 aaKnown RBP6.01□□□□□ -1.45
USP3-215ENST00000559771 FAM149AA5PLN7 773 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 CETN3O15182 167 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 PMM2O15305 246 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 SLC16A3O15427 465 aaKnown RBP6.01□□□□□ -1.45
USP3-215ENST00000559771 FLRT2O43155 660 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 PAPSS1O43252 624 aaPredicted RBP6.01□□□□□ -1.45
USP3-215ENST00000559771 PCDHGA12O60330 932 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 ACSL4O60488 711 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 TBL1XO60907 577 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 LETM1O95202 739 aaPredicted RBP6.01□□□□□ -1.45
USP3-215ENST00000559771 SEMA4FO95754 770 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 LTFP02788 710 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 SETSIPP0DME0 302 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 EPB41P11171 864 aaKnown RBP6.01□□□□□ -1.45
USP3-215ENST00000559771 ACADMP11310 421 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 LCP1P13796 627 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 CD19P15391 556 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 TRIM21P19474 475 aaKnown RBP6.01□□□□□ -1.45
USP3-215ENST00000559771 BRD2P25440 801 aaKnown RBP6.01□□□□□ -1.45
USP3-215ENST00000559771 CD27P26842 260 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 GRIA4P48058 902 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 FMO5P49326 533 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 HARS2P49590 506 aaKnown RBP6.01□□□□□ -1.45
USP3-215ENST00000559771 METAP1P53582 386 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 PITX1P78337 314 aaPredicted RBP6.01□□□□□ -1.45
USP3-215ENST00000559771 FKBP3Q00688 224 aaKnown RBP6.01□□□□□ -1.45
USP3-215ENST00000559771 LRMPQ12912 555 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 EIF4EBP2Q13542 120 aaPredicted RBP6.01□□□□□ -1.45
USP3-215ENST00000559771 SMAD1Q15797 465 aaKnown RBP6.01□□□□□ -1.45
USP3-215ENST00000559771 CNGA2Q16280 664 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 COL28A1Q2UY09 1125 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 HNRNPA1L2Q32P51 320 aaKnown RBP6.01□□□□□ -1.45
USP3-215ENST00000559771 FNDC3BQ53EP0 1204 aaKnown RBP6.01□□□□□ -1.45
USP3-215ENST00000559771 DCAF17Q5H9S7 520 aaPredicted RBP6.01□□□□□ -1.45
USP3-215ENST00000559771 PRAMEF14Q5SWL7 426 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 C9orf64Q5T6V5 341 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 ZNF658Q5TYW1 1059 aaPredicted RBP6.01□□□□□ -1.45
USP3-215ENST00000559771 TMEM270Q6UE05 265 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 IL27RAQ6UWB1 636 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 ARHGEF19Q8IW93 802 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 HOMEZQ8IX15 550 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 AHI1Q8N157 1196 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 DTWD1Q8N5C7 304 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 CCDC150Q8NCX0 1101 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 FIBINQ8TAL6 211 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 DQX1Q8TE96 717 aaKnown RBP6.01□□□□□ -1.45
USP3-215ENST00000559771 SETD7Q8WTS6 366 aaKnown RBP6.01□□□□□ -1.45
USP3-215ENST00000559771 AZIN2Q96A70 460 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 CRELD1Q96HD1 420 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 KREMEN1Q96MU8 473 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 FAM129BQ96TA1 746 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 PABPC3Q9H361 631 aaKnown RBP6.01□□□□□ -1.45
USP3-215ENST00000559771 LRRC4Q9HBW1 653 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 DKK4Q9UBT3 224 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 CYTH4Q9UIA0 394 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 SLCO3A1Q9UIG8 710 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 KIAA1257Q9ULG3 409 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 CNTN6Q9UQ52 1028 aa6.01□□□□□ -1.45
USP3-215ENST00000559771 APOBEC2Q9Y235 224 aaKnown RBP6.01□□□□□ -1.45
USP3-215ENST00000559771 ITIH6Q6UXX5 1313 aa6□□□□□ -1.45
USP3-215ENST00000559771 DOCK9Q9BZ29 2069 aa6□□□□□ -1.45
USP3-215ENST00000559771 MYLKQ15746 1914 aa6□□□□□ -1.45
USP3-215ENST00000559771 A0A1B0GTQ1 180 aa6□□□□□ -1.45
USP3-215ENST00000559771 A0A1W2PPC4 97 aa6□□□□□ -1.45
USP3-215ENST00000559771 A0A1W2PR77 199 aa6□□□□□ -1.45
USP3-215ENST00000559771 TRABD2BA6NFA1 517 aa6□□□□□ -1.45
USP3-215ENST00000559771 TTC34A8MYJ7 566 aa6□□□□□ -1.45
USP3-215ENST00000559771 CBX4O00257 560 aa6□□□□□ -1.45
USP3-215ENST00000559771 VILLO15195 856 aa6□□□□□ -1.45
USP3-215ENST00000559771 GSC2O15499 205 aa6□□□□□ -1.45
USP3-215ENST00000559771 IRAK2O43187 625 aa6□□□□□ -1.45
USP3-215ENST00000559771 TNFSF14O43557 240 aa6□□□□□ -1.45
USP3-215ENST00000559771 STX10O60499 249 aa6□□□□□ -1.45
USP3-215ENST00000559771 FSBPO95073 299 aa6□□□□□ -1.45
USP3-215ENST00000559771 IGLV3-25P01717 112 aa6□□□□□ -1.45
USP3-215ENST00000559771 PAEPP09466 180 aa6□□□□□ -1.45
USP3-215ENST00000559771 VAV1P15498 845 aa6□□□□□ -1.45
USP3-215ENST00000559771 RDXP35241 583 aaKnown RBP6□□□□□ -1.45
USP3-215ENST00000559771 CSKP41240 450 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms