RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 F9P00740 461 aa15.33■□□□□ 0.04
LRRC28-213ENST00000559399 ITGAVP06756 1048 aa15.33■□□□□ 0.04
LRRC28-213ENST00000559399 ZNF18P17022 549 aa15.33■□□□□ 0.04
LRRC28-213ENST00000559399 TFE3P19532 575 aaPredicted RBP15.33■□□□□ 0.04
LRRC28-213ENST00000559399 NUDT1P36639 197 aa15.33■□□□□ 0.04
LRRC28-213ENST00000559399 ARRB1P49407 418 aaPredicted RBP15.33■□□□□ 0.04
LRRC28-213ENST00000559399 KRT83P78385 493 aa15.33■□□□□ 0.04
LRRC28-213ENST00000559399 DEUP1Q05D60 604 aa15.33■□□□□ 0.04
LRRC28-213ENST00000559399 SLC25A52Q3SY17 297 aa15.33■□□□□ 0.04
LRRC28-213ENST00000559399 POM121L1PQ3SYA9 428 aa15.33■□□□□ 0.04
LRRC28-213ENST00000559399 CCDC157Q569K6 752 aa15.33■□□□□ 0.04
LRRC28-213ENST00000559399 FAM102AQ5T9C2 384 aaPredicted RBP15.33■□□□□ 0.04
LRRC28-213ENST00000559399 KLHDC7AQ5VTJ3 777 aa15.33■□□□□ 0.04
LRRC28-213ENST00000559399 AGBL4Q5VU57 503 aa15.33■□□□□ 0.04
LRRC28-213ENST00000559399 DPY19L2P1Q6NXN4 242 aa15.33■□□□□ 0.04
LRRC28-213ENST00000559399 LRRC31Q6UY01 552 aa15.33■□□□□ 0.04
LRRC28-213ENST00000559399 PRPF39Q86UA1 669 aaKnown RBP15.33■□□□□ 0.04
LRRC28-213ENST00000559399 GATAD2AQ86YP4 633 aa15.33■□□□□ 0.04
LRRC28-213ENST00000559399 MSANTD4Q8NCY6 345 aa15.33■□□□□ 0.04
LRRC28-213ENST00000559399 SAP25Q8TEE9 199 aa15.33■□□□□ 0.04
LRRC28-213ENST00000559399 NT5C3BQ969T7 300 aa15.33■□□□□ 0.04
LRRC28-213ENST00000559399 C18orf8Q96DM3 657 aa15.33■□□□□ 0.04
LRRC28-213ENST00000559399 PGAP3Q96FM1 320 aaPredicted RBP15.33■□□□□ 0.04
LRRC28-213ENST00000559399 DMTF1Q9Y222 760 aa15.33■□□□□ 0.04
LRRC28-213ENST00000559399 I6L893 689 aaPredicted RBP15.32■□□□□ 0.04
LRRC28-213ENST00000559399 BNIP3LO60238 219 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 CNTN5O94779 1100 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 LSM8O95777 96 aaKnown RBP15.32■□□□□ 0.04
LRRC28-213ENST00000559399 UCHL3P15374 230 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 EPHA8P29322 1005 aaPredicted RBP15.32■□□□□ 0.04
LRRC28-213ENST00000559399 GABRB2P47870 512 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 KCNMA1Q12791 1236 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 CNTN1Q12860 1018 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 SHBQ15464 509 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 ALFQ53S48 1182 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 C6orf118Q5T5N4 469 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 ACBD5Q5T8D3 534 aaPredicted RBP15.32■□□□□ 0.04
LRRC28-213ENST00000559399 TAF3Q5VWG9 929 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 SETD3Q86TU7 594 aaPredicted RBP15.32■□□□□ 0.04
LRRC28-213ENST00000559399 TRIM69Q86WT6 500 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 ERICH1Q86X53 443 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 XYLT1Q86Y38 959 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 ZNF683Q8IZ20 524 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 OXR1Q8N573 874 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 MFSD2AQ8NA29 543 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 DCAF4L2Q8NA75 395 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 ATP11CQ8NB49 1132 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 PIP4K2CQ8TBX8 421 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 MDM1Q8TC05 714 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 CCDC114Q96M63 670 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 TBCBQ99426 244 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 PSMB7Q99436 277 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 NUP62CLQ9H1M0 184 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 ERVMER34-1Q9H9K5 563 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 VPS51Q9UID3 782 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 LHX6Q9UPM6 363 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 FARP1Q9Y4F1 1045 aaPredicted RBP15.32■□□□□ 0.04
LRRC28-213ENST00000559399 SNX10Q9Y5X0 201 aa15.32■□□□□ 0.04
LRRC28-213ENST00000559399 F8VZ95 297 aa15.31■□□□□ 0.04
LRRC28-213ENST00000559399 SNAP91O60641 907 aa15.31■□□□□ 0.04
LRRC28-213ENST00000559399 SRCP12931 536 aa15.31■□□□□ 0.04
LRRC28-213ENST00000559399 EEF1GP26641 437 aaKnown RBP15.31■□□□□ 0.04
LRRC28-213ENST00000559399 MAT2AP31153 395 aaKnown RBP15.31■□□□□ 0.04
LRRC28-213ENST00000559399 CLCN6P51797 869 aa15.31■□□□□ 0.04
LRRC28-213ENST00000559399 OVGP1Q12889 678 aa15.31■□□□□ 0.04
LRRC28-213ENST00000559399 SMAD1Q15797 465 aaKnown RBP15.31■□□□□ 0.04
LRRC28-213ENST00000559399 DHRS13Q6UX07 377 aa15.31■□□□□ 0.04
LRRC28-213ENST00000559399 TFAP2DQ7Z6R9 452 aa15.31■□□□□ 0.04
LRRC28-213ENST00000559399 IQCHQ86VS3 1027 aa15.31■□□□□ 0.04
LRRC28-213ENST00000559399 CNDP2Q96KP4 475 aaKnown RBP15.31■□□□□ 0.04
LRRC28-213ENST00000559399 C1orf74Q96LT6 269 aa15.31■□□□□ 0.04
LRRC28-213ENST00000559399 NAA15Q9BXJ9 866 aaKnown RBP15.31■□□□□ 0.04
LRRC28-213ENST00000559399 PREBQ9HCU5 417 aa15.31■□□□□ 0.04
LRRC28-213ENST00000559399 ARHGAP20Q9P2F6 1191 aa15.31■□□□□ 0.04
LRRC28-213ENST00000559399 PCDHGA1Q9Y5H4 931 aa15.31■□□□□ 0.04
LRRC28-213ENST00000559399 PCNX2A6NKB5 2137 aa15.31■□□□□ 0.04
LRRC28-213ENST00000559399 IGLV3-10A0A075B6K4 115 aa15.3■□□□□ 0.04
LRRC28-213ENST00000559399 FAM170AA1A519 330 aa15.3■□□□□ 0.04
LRRC28-213ENST00000559399 FAM149AA5PLN7 773 aa15.3■□□□□ 0.04
LRRC28-213ENST00000559399 DRGXA6NNA5 263 aa15.3■□□□□ 0.04
LRRC28-213ENST00000559399 E9PAM4 449 aa15.3■□□□□ 0.04
LRRC28-213ENST00000559399 GOLGA8SH3BPF8 625 aa15.3■□□□□ 0.04
LRRC28-213ENST00000559399 K7ERQ8 282 aa15.3■□□□□ 0.04
LRRC28-213ENST00000559399 ENC1O14682 589 aa15.3■□□□□ 0.04
LRRC28-213ENST00000559399 MAGEC1O60732 1142 aa15.3■□□□□ 0.04
LRRC28-213ENST00000559399 MT-CO1P00395 513 aa15.3■□□□□ 0.04
LRRC28-213ENST00000559399 FLT3P36888 993 aa15.3■□□□□ 0.04
LRRC28-213ENST00000559399 CCDC15Q0P6D6 951 aa15.3■□□□□ 0.04
LRRC28-213ENST00000559399 SETMARQ53H47 684 aaPredicted RBP15.3■□□□□ 0.04
LRRC28-213ENST00000559399 C2CD6Q53TS8 623 aa15.3■□□□□ 0.04
LRRC28-213ENST00000559399 TCP11X2Q5H9J9 407 aa15.3■□□□□ 0.04
LRRC28-213ENST00000559399 CT47A1Q5JQC4 288 aaPredicted RBP15.3■□□□□ 0.04
LRRC28-213ENST00000559399 NOP9Q86U38 636 aaKnown RBP15.3■□□□□ 0.04
LRRC28-213ENST00000559399 MARCH9Q86YJ5 346 aa15.3■□□□□ 0.04
LRRC28-213ENST00000559399 OR2A12Q8NGT7 310 aa15.3■□□□□ 0.04
LRRC28-213ENST00000559399 EPS8L1Q8TE68 723 aa15.3■□□□□ 0.04
LRRC28-213ENST00000559399 STK33Q9BYT3 514 aa15.3■□□□□ 0.04
LRRC28-213ENST00000559399 SAMSN1Q9NSI8 373 aaKnown RBP15.3■□□□□ 0.04
LRRC28-213ENST00000559399 MPP6Q9NZW5 540 aa15.3■□□□□ 0.04
LRRC28-213ENST00000559399 DKK4Q9UBT3 224 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms