RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 GNA12Q03113 381 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 SCAPQ12770 1279 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 PIGHQ14442 188 aaPredicted RBP4.48□□□□□ -1.69
SNX1-205ENST00000559339 POLD3Q15054 466 aaPredicted RBP4.48□□□□□ -1.69
SNX1-205ENST00000559339 SF3A2Q15428 464 aaKnown RBP4.48□□□□□ -1.69
SNX1-205ENST00000559339 DLG2Q15700 870 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 CST6Q15828 149 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 CCDC6Q16204 474 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 RSPO4Q2I0M5 234 aaPredicted RBP4.48□□□□□ -1.69
SNX1-205ENST00000559339 PPP1R15BQ5SWA1 713 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 ERMARDQ5T6L9 678 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 C9orf64Q5T6V5 341 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 SH3PXD2AQ5TCZ1 1133 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 OTUD1Q5VV17 481 aaPredicted RBP4.48□□□□□ -1.69
SNX1-205ENST00000559339 PLEKHA7Q6IQ23 1121 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 TRNP1Q6NT89 227 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 ALKBH5Q6P6C2 394 aaKnown RBP4.48□□□□□ -1.69
SNX1-205ENST00000559339 SLC23A3Q6PIS1 610 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 ERMP1Q7Z2K6 904 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 DGLUCYQ7Z3D6 616 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 C14orf80Q86SX3 495 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 FAM124AQ86V42 546 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 PSTKQ8IV42 348 aaKnown RBP4.48□□□□□ -1.69
SNX1-205ENST00000559339 CNGA4Q8IV77 575 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 DEFB119Q8N690 84 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 FRMD1Q8N878 549 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 DCAF4L2Q8NA75 395 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 OR8K1Q8NGG5 319 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 OR14C36Q8NHC7 312 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 CTNNBL1Q8WYA6 563 aaPredicted RBP4.48□□□□□ -1.69
SNX1-205ENST00000559339 SNX19Q92543 992 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 PTPRN2Q92932 1015 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 SKA1Q96BD8 255 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 ZNF653Q96CK0 615 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 RMDN1Q96DB5 314 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 PPP1R16AQ96I34 528 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 LMLNQ96KR4 655 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 MRGPRX3Q96LB0 322 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 CCDC42Q96M95 316 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 RTKNQ9BST9 563 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 SYT11Q9BT88 431 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 GPR174Q9BXC1 333 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 TMEM121BQ9BXQ6 578 aaPredicted RBP4.48□□□□□ -1.69
SNX1-205ENST00000559339 ADAM33Q9BZ11 813 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 TRIM5Q9C035 493 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 CEP44Q9C0F1 390 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 ISCUQ9H1K1 167 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 MIR1-1HGQ9H1L0 117 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 SLC6A17Q9H1V8 727 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 MAGEH1Q9H213 219 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 ZWILCHQ9H900 591 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 ATP13A1Q9HD20 1204 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 PARD6AQ9NPB6 346 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 ANLNQ9NQW6 1124 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 TMEM248Q9NWD8 314 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 FBXL12Q9NXK8 326 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 TAS2R14Q9NYV8 317 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 MYO1AQ9UBC5 1043 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 EVLQ9UI08 416 aaPredicted RBP4.48□□□□□ -1.69
SNX1-205ENST00000559339 DNAI1Q9UI46 699 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 SLCO3A1Q9UIG8 710 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 MBD1Q9UIS9 605 aaPredicted RBP4.48□□□□□ -1.69
SNX1-205ENST00000559339 PILRBQ9UKJ0 227 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 INTS6Q9UL03 887 aaKnown RBP4.48□□□□□ -1.69
SNX1-205ENST00000559339 FZD4Q9ULV1 537 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 HS3ST2Q9Y278 367 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.48□□□□□ -1.69
SNX1-205ENST00000559339 ATG2BQ96BY7 2078 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 FRYLO94915 3013 aa4.48□□□□□ -1.69
SNX1-205ENST00000559339 MYOFQ9NZM1 2061 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 TBC1D3DA0A087WVF3 549 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 TBC1D3IA0A087WXS9 549 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 A0A087X0T9 212 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 TBC1D3EA0A087X179 549 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 TBC1D3KA0A087X1G2 549 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 A0A1B0GTW7 788 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 A0A1W2PP55 124 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 SSU72P8A0A1W2PR75 194 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 TCRBV5S1A1TA0A578 114 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 LNP1A1A4G5 178 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 TBC1D3FA6NER0 549 aaPredicted RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 TMEM191CA6NGB0 347 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 TBC1D3LB9A6J9 549 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 AKR1B15C9JRZ8 316 aaPredicted RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 I6L893 689 aaPredicted RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 SLC30A4O14863 429 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 MID1O15344 667 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 BCAT2O15382 392 aaPredicted RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 SLC7A4O43246 635 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 CCP110O43303 1012 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 BUB1O43683 1085 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 ATP9BO43861 1147 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 GJB6O95452 261 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 SEMA4FO95754 770 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 PRNPP04156 253 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 H2AFZP0C0S5 128 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 TBC1D3HP0C7X1 549 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 FAM228BP0C875 321 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 GOT1P17174 413 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 TGM1P22735 817 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms