RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 MICALL2Q8IY33 904 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 RP9Q8TA86 221 aaKnown RBP7.23□□□□□ -1.25
USP3-210ENST00000559192 RIN3Q8TB24 985 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 NRG4Q8WWG1 115 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 SKA1Q96BD8 255 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 CIB1Q99828 191 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 FDXACB1Q9BRP7 624 aaPredicted RBP7.23□□□□□ -1.25
USP3-210ENST00000559192 NAT9Q9BTE0 207 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 DGCR6LQ9BY27 220 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 UBE2OQ9C0C9 1292 aaKnown RBP7.23□□□□□ -1.25
USP3-210ENST00000559192 PLGRKTQ9HBL7 147 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 ZSCAN32Q9NX65 697 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 MAP3K20Q9NYL2 800 aaKnown RBP7.23□□□□□ -1.25
USP3-210ENST00000559192 CD274Q9NZQ7 290 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 FAM8A1Q9UBU6 413 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 TJP2Q9UDY2 1190 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 AFF4Q9UHB7 1163 aaKnown RBP7.23□□□□□ -1.25
USP3-210ENST00000559192 MYH7BA7E2Y1 1941 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 MYH3P11055 1940 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 A0A087WXM4 84 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 A0A0A0MRY4 1105 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 TMEM114B3SHH9 223 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 TRIM38O00635 465 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 TIPRLO75663 272 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 KLHL18O94889 574 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 HNRNPLP14866 589 aaKnown RBP eCLIP7.23□□□□□ -1.253e-6■■■□□ 15.1
USP3-210ENST00000559192 IL1R2P27930 398 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 NR2C2P49116 596 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 ADIGQ0VDE8 80 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 BTBD8Q5XKL5 378 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 RHBDF2Q6PJF5 856 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 LINC00523Q86TU6 105 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 PDSS2Q86YH6 399 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 CROCCP3Q8IVE0 287 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 UNC5BQ8IZJ1 945 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 SPATA13Q96N96 652 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 STN1Q9H668 368 aaKnown RBP7.23□□□□□ -1.25
USP3-210ENST00000559192 DNAAF2Q9NVR5 837 aaKnown RBP7.23□□□□□ -1.25
USP3-210ENST00000559192 COPG2Q9UBF2 871 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 ZNRF3Q9ULT6 936 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 MYOCOSA0A1B0GUC4 107 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 CCDC189A1A4V9 331 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 B4GALT5O43286 388 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 OR6B1O95007 311 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 GSNP06396 782 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 IFNA8P32881 189 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 GTF2A2P52657 109 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 FSTL1Q12841 308 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 LAMC2Q13753 1193 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 POLD3Q15054 466 aaPredicted RBP7.23□□□□□ -1.25
USP3-210ENST00000559192 ZIK1Q3SY52 487 aaPredicted RBP7.23□□□□□ -1.25
USP3-210ENST00000559192 NADK2Q4G0N4 442 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 AASDHQ4L235 1098 aaPredicted RBP7.23□□□□□ -1.25
USP3-210ENST00000559192 SLC9B1Q4ZJI4 515 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 SGO1Q5FBB7 561 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 PPM1LQ5SGD2 360 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 SAMD7Q7Z3H4 446 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 SNX31Q8N9S9 440 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 FAM47BQ8NA70 645 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 MAGEE2Q8TD90 523 aaPredicted RBP7.23□□□□□ -1.25
USP3-210ENST00000559192 RMDN1Q96DB5 314 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 FAR2Q96K12 515 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 LENG8Q96PV6 779 aaPredicted RBP7.23□□□□□ -1.25
USP3-210ENST00000559192 WDCPQ9H6R7 721 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 CDHR5Q9HBB8 845 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 RAB26Q9ULW5 256 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 A6NHS1 94 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 PSMD12O00232 456 aaPredicted RBP7.23□□□□□ -1.25
USP3-210ENST00000559192 ITGAXP20702 1163 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 MTTPP55157 894 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 OGDHQ02218 1023 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 FBXO16Q8IX29 292 aaPredicted RBP7.23□□□□□ -1.25
USP3-210ENST00000559192 PARP8Q8N3A8 854 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 RTL3Q8N8U3 475 aaKnown RBP7.23□□□□□ -1.25
USP3-210ENST00000559192 TERB1Q8NA31 727 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 LRTOMTQ8WZ04 291 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 DDX1Q92499 740 aaKnown RBP7.23□□□□□ -1.25
USP3-210ENST00000559192 AZIN2Q96A70 460 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 GJD4Q96KN9 370 aaPredicted RBP7.23□□□□□ -1.25
USP3-210ENST00000559192 MORF4L1Q9UBU8 362 aa7.23□□□□□ -1.25
USP3-210ENST00000559192 FAM95CA0A1B0GW59 222 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 RNASEH1O60930 286 aaKnown RBP7.22□□□□□ -1.25
USP3-210ENST00000559192 TOMM70O94826 608 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 ASS1P00966 412 aaKnown RBP7.22□□□□□ -1.25
USP3-210ENST00000559192 HMBSP08397 361 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 CCR3P51677 355 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 CNTN2Q02246 1040 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 BST2Q10589 180 aaKnown RBP7.22□□□□□ -1.25
USP3-210ENST00000559192 MAPRE1Q15691 268 aaKnown RBP7.22□□□□□ -1.25
USP3-210ENST00000559192 PERM1Q5SV97 790 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 ZNF470Q6ECI4 717 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 TREML1Q86YW5 311 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 DENND6AQ8IWF6 608 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 DEFB106AQ8N104 65 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 SHCBP1Q8NEM2 672 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 AKT1S1Q96B36 256 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 TBCBQ99426 244 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 RUBCNLQ9H714 662 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 PCDH18Q9HCL0 1135 aa7.22□□□□□ -1.25
USP3-210ENST00000559192 PNPLA3Q9NST1 481 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms