RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 PARVAQ9NVD7 372 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 SLC12A6Q9UHW9 1150 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 CLEC4EQ9ULY5 219 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 ALG6Q9Y672 507 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 CACNA1AO00555 2505 aa10.61□□□□□ -0.71
TPM1-212ENST00000558347 A0A1W2PQF6 199 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 TCRBV21S2A2A0A5A6 115 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 PRR5-ARHGAP8B1AHC4 643 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 ATMINO43313 823 aaPredicted RBP10.6□□□□□ -0.71
TPM1-212ENST00000558347 GDF9O60383 454 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 LTFP02788 710 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 PTGIRP43119 386 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 ACADSBP45954 432 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 FNTAP49354 379 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 ARHGAP8P85298 464 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 DHX9Q08211 1270 aaKnown RBP10.6□□□□□ -0.71
TPM1-212ENST00000558347 MAMLD1Q13495 774 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 PUM1Q14671 1186 aaKnown RBP eCLIP10.6□□□□□ -0.715e-9■□□□□ 8.1
TPM1-212ENST00000558347 GEN1Q17RS7 908 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 USP39Q53GS9 565 aaKnown RBP10.6□□□□□ -0.71
TPM1-212ENST00000558347 PPP1R15BQ5SWA1 713 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 MSANTD2Q6P1R3 559 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 NUDT18Q6ZVK8 323 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 TRMT11Q7Z4G4 463 aaKnown RBP10.6□□□□□ -0.71
TPM1-212ENST00000558347 XYLT1Q86Y38 959 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 JAMLQ86YT9 394 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 ZDHHC17Q8IUH5 632 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 CPXM2Q8N436 756 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 FRMD1Q8N878 549 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 ZNF473Q8WTR7 871 aaKnown RBP10.6□□□□□ -0.71
TPM1-212ENST00000558347 HMGB4Q8WW32 186 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 RLN3Q8WXF3 142 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 IRGQQ8WZA9 623 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 TLCD1Q96CP7 247 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 ERLEC1Q96DZ1 483 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 TMEM109Q9BVC6 243 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 SMOC1Q9H4F8 434 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 CD248Q9HCU0 757 aa10.6□□□□□ -0.71
TPM1-212ENST00000558347 POLMQ9NP87 494 aaPredicted RBP10.6□□□□□ -0.71
TPM1-212ENST00000558347 HBS1LQ9Y450 684 aaKnown RBP10.6□□□□□ -0.71
TPM1-212ENST00000558347 ABCA7Q8IZY2 2146 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 PLXND1Q9Y4D7 1925 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 WASH3PC4AMC7 463 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 GFRA2O00451 464 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 TSPAN3O60637 253 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 ALDH1A2O94788 518 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 FBXO21O94952 628 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 ERBB2P04626 1255 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 FYNP06241 537 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 HOXB2P14652 356 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 NTSR1P30989 418 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 SCNN1AP37088 669 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 P2RY2P41231 377 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 PEX5P50542 639 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 ATXN1P54253 815 aaKnown RBP10.59□□□□□ -0.71
TPM1-212ENST00000558347 GUCY1A3Q02108 690 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 SF3A2Q15428 464 aaKnown RBP10.59□□□□□ -0.71
TPM1-212ENST00000558347 C2CD6Q53TS8 623 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 PLA2G2CQ5R387 149 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 PMS2CLQ68D20 193 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 DNAJC24Q6P3W2 148 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 ERMP1Q7Z2K6 904 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 SCUBE3Q8IX30 993 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 C12orf50Q8NA57 414 aaPredicted RBP10.59□□□□□ -0.71
TPM1-212ENST00000558347 MAIP1Q8WWC4 291 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 ALG3Q92685 438 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 PIWIL1Q96J94 861 aaKnown RBP10.59□□□□□ -0.71
TPM1-212ENST00000558347 CCT8L2Q96SF2 557 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 GABRG3Q99928 467 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 SYNCQ9H7C4 482 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 BCCIPQ9P287 314 aaKnown RBP eCLIP10.59□□□□□ -0.71
TPM1-212ENST00000558347 MTRF1LQ9UGC7 380 aaKnown RBP10.59□□□□□ -0.71
TPM1-212ENST00000558347 STOML2Q9UJZ1 356 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 SLC27A6Q9Y2P4 619 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 PCDHA3Q9Y5H8 950 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 RAD54BQ9Y620 910 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 THADAQ6YHU6 1953 aa10.59□□□□□ -0.71
TPM1-212ENST00000558347 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.58□□□□□ -0.72
TPM1-212ENST00000558347 GMNCA6NCL1 334 aa10.58□□□□□ -0.72
TPM1-212ENST00000558347 C5orf60A6NFR6 353 aa10.58□□□□□ -0.72
TPM1-212ENST00000558347 TMEM191CA6NGB0 347 aa10.58□□□□□ -0.72
TPM1-212ENST00000558347 SIGLEC16A6NMB1 481 aa10.58□□□□□ -0.72
TPM1-212ENST00000558347 E5RJQ4 531 aa10.58□□□□□ -0.72
TPM1-212ENST00000558347 RHOBTB1O94844 696 aa10.58□□□□□ -0.72
TPM1-212ENST00000558347 FSBPO95073 299 aa10.58□□□□□ -0.72
TPM1-212ENST00000558347 IGLV3-27P01718 113 aa10.58□□□□□ -0.72
TPM1-212ENST00000558347 ZNF806P0C7X5 589 aa10.58□□□□□ -0.72
TPM1-212ENST00000558347 NCAM1P13591 858 aa10.58□□□□□ -0.72
TPM1-212ENST00000558347 GABRG2P18507 467 aa10.58□□□□□ -0.72
TPM1-212ENST00000558347 HOXD9P28356 352 aaPredicted RBP10.58□□□□□ -0.72
TPM1-212ENST00000558347 MAN1A1P33908 653 aa10.58□□□□□ -0.72
TPM1-212ENST00000558347 FLT3P36888 993 aa10.58□□□□□ -0.72
TPM1-212ENST00000558347 MPLP40238 635 aa10.58□□□□□ -0.72
TPM1-212ENST00000558347 HARS2P49590 506 aaKnown RBP10.58□□□□□ -0.72
TPM1-212ENST00000558347 SGSHP51688 502 aa10.58□□□□□ -0.72
TPM1-212ENST00000558347 BYSLQ13895 437 aaKnown RBP10.58□□□□□ -0.72
TPM1-212ENST00000558347 SLMAPQ14BN4 828 aa10.58□□□□□ -0.72
TPM1-212ENST00000558347 MAP7D1Q3KQU3 841 aa10.58□□□□□ -0.72
TPM1-212ENST00000558347 KRT71Q3SY84 523 aa10.58□□□□□ -0.72
TPM1-212ENST00000558347 TTC19Q6DKK2 380 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms