RNA–Protein interactions for RNA: ENST00000557609.5

LGMN-217, Transcript of legumain, humanhuman

TSL 5

Gene LGMN, Length 1,832 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-217ENST00000557609 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.21■□□□□ 0.35
LGMN-217ENST00000557609 MRPS31Q92665 395 aaKnown RBP17.21■□□□□ 0.35
LGMN-217ENST00000557609 ZNF419Q96HQ0 510 aaPredicted RBP17.21■□□□□ 0.35
LGMN-217ENST00000557609 ZFRQ96KR1 1074 aaKnown RBP17.21■□□□□ 0.35
LGMN-217ENST00000557609 LRRC3Q9BY71 257 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 SP110Q9HB58 689 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 GLOD4Q9HC38 313 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 UBP1Q9NZI7 540 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 FETUBQ9UGM5 382 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 J3KR12 359 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 TRDMT1O14717 391 aaKnown RBP17.21■□□□□ 0.35
LGMN-217ENST00000557609 CACNG3O60359 315 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 LPXNO60711 386 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 ARHGEF15O94989 841 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 OLFM2O95897 454 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 HLA-DQB2P05538 268 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 GSTA2P09210 222 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 MGAT1P26572 445 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 STX2P32856 288 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 CLCN4P51793 760 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 YBEYP58557 167 aaPredicted RBP17.21■□□□□ 0.35
LGMN-217ENST00000557609 PPARDQ03181 441 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 PPM1LQ5SGD2 360 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 TTC19Q6DKK2 380 aaPredicted RBP17.21■□□□□ 0.35
LGMN-217ENST00000557609 UNC5AQ6ZN44 842 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 OR52K1Q8NGK4 314 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 SLC22A17Q8WUG5 538 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 STAMBPL1Q96FJ0 436 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 OXNAD1Q96HP4 312 aaPredicted RBP17.21■□□□□ 0.35
LGMN-217ENST00000557609 PRICKLE1Q96MT3 831 aaPredicted RBP17.21■□□□□ 0.35
LGMN-217ENST00000557609 FCRL5Q96RD9 977 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 CYTH2Q99418 400 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 RETREG1Q9H6L5 497 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 PLAC1Q9HBJ0 212 aa17.21■□□□□ 0.35
LGMN-217ENST00000557609 NYNRINQ9P2P1 1898 aaKnown RBP17.21■□□□□ 0.35
LGMN-217ENST00000557609 DOCK4Q8N1I0 1966 aa17.21■□□□□ 0.34
LGMN-217ENST00000557609 MYO18AQ92614 2054 aaKnown RBP17.21■□□□□ 0.34
LGMN-217ENST00000557609 GRXCR1A8MXD5 290 aa17.2■□□□□ 0.34
LGMN-217ENST00000557609 C5orf67F2Z3F1 127 aa17.2■□□□□ 0.34
LGMN-217ENST00000557609 CCL16O15467 120 aa17.2■□□□□ 0.34
LGMN-217ENST00000557609 PSMD3O43242 534 aa17.2■□□□□ 0.34
LGMN-217ENST00000557609 USP12O75317 370 aa17.2■□□□□ 0.34
LGMN-217ENST00000557609 PIAS1O75925 651 aa17.2■□□□□ 0.34
LGMN-217ENST00000557609 PEX11BO96011 259 aa17.2■□□□□ 0.34
LGMN-217ENST00000557609 CDH4P55283 916 aa17.2■□□□□ 0.34
LGMN-217ENST00000557609 RPS24P62847 133 aaKnown RBP17.2■□□□□ 0.34
LGMN-217ENST00000557609 ADGRF1Q5T601 910 aa17.2■□□□□ 0.34
LGMN-217ENST00000557609 CASC4Q6P4E1 433 aa17.2■□□□□ 0.34
LGMN-217ENST00000557609 FATE1Q969F0 183 aa17.2■□□□□ 0.34
LGMN-217ENST00000557609 PAFAH2Q99487 392 aa17.2■□□□□ 0.34
LGMN-217ENST00000557609 DDX50Q9BQ39 737 aaKnown RBP17.2■□□□□ 0.34
LGMN-217ENST00000557609 SELENOSQ9BQE4 189 aa17.2■□□□□ 0.34
LGMN-217ENST00000557609 CORO1BQ9BR76 489 aa17.2■□□□□ 0.34
LGMN-217ENST00000557609 TRIM56Q9BRZ2 755 aaKnown RBP17.2■□□□□ 0.34
LGMN-217ENST00000557609 ATXN3LQ9H3M9 355 aa17.2■□□□□ 0.34
LGMN-217ENST00000557609 LRRC40Q9H9A6 602 aa17.2■□□□□ 0.34
LGMN-217ENST00000557609 PSMC3IPQ9P2W1 217 aaPredicted RBP17.2■□□□□ 0.34
LGMN-217ENST00000557609 AAR2Q9Y312 384 aaKnown RBP17.2■□□□□ 0.34
LGMN-217ENST00000557609 PCDHA11Q9Y5I1 949 aa17.2■□□□□ 0.34
LGMN-217ENST00000557609 CPQQ9Y646 472 aa17.2■□□□□ 0.34
LGMN-217ENST00000557609 ANAPC1Q9H1A4 1944 aa17.2■□□□□ 0.34
LGMN-217ENST00000557609 FOXO6A8MYZ6 492 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 CDC25CP30307 473 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 IRS1P35568 1242 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 ACVRL1P37023 503 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 MSH2P43246 934 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 RENBPP51606 427 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 CRADDP78560 199 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 SERINC3Q13530 473 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 HNRNPDQ14103 355 aaKnown RBP17.19■□□□□ 0.34
LGMN-217ENST00000557609 RASA2Q15283 850 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 KBTBD12Q3ZCT8 623 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 C9orf50Q5SZB4 431 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 MAB21L3Q8N8X9 362 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 DNAAF3Q8N9W5 541 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 SPATA22Q8NHS9 363 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 NSMCE1Q8WV22 266 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 PABPC5Q96DU9 382 aaKnown RBP17.19■□□□□ 0.34
LGMN-217ENST00000557609 GCNAQ96QF7 691 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 CNOT10Q9H9A5 744 aaKnown RBP17.19■□□□□ 0.34
LGMN-217ENST00000557609 CASS4Q9NQ75 786 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 SYBUQ9NX95 663 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.19■□□□□ 0.34
LGMN-217ENST00000557609 GRM6O15303 877 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 TSPAN3O60637 253 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 SHOX2O60902 331 aaPredicted RBP17.19■□□□□ 0.34
LGMN-217ENST00000557609 CLDN11O75508 207 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 ANXA9O76027 345 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 RB1P06400 928 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 MYL4P12829 197 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 MDH1P40925 334 aaKnown RBP17.19■□□□□ 0.34
LGMN-217ENST00000557609 IFNAR2P48551 515 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 SGSHP51688 502 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 GNGT1P63211 74 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 GUCY1A3Q02108 690 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 IL10RBQ08334 325 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 MARC1Q5VT66 337 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 FAM109BQ6ICB4 259 aaPredicted RBP17.19■□□□□ 0.34
LGMN-217ENST00000557609 NAPEPLDQ6IQ20 393 aa17.19■□□□□ 0.34
LGMN-217ENST00000557609 PRPF39Q86UA1 669 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms