RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 OR13H1Q8NG92 308 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 KCNE4Q8WWG9 221 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 ERCC4Q92889 916 aaPredicted RBP12.65□□□□□ -0.38
SNX6-209ENST00000557265 PRMT1Q99873 361 aaKnown RBP12.65□□□□□ -0.38
SNX6-209ENST00000557265 TRIM62Q9BVG3 475 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 SEMA4CQ9C0C4 833 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 ABCG4Q9H172 646 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 POLR1BQ9H9Y6 1135 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 SLC12A6Q9UHW9 1150 aa12.65□□□□□ -0.38
SNX6-209ENST00000557265 TCAF2A6NFQ2 919 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 CYSRT1A8MQ03 144 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 ACADSBP45954 432 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 VASPP50552 380 aaPredicted RBP12.64□□□□□ -0.39
SNX6-209ENST00000557265 ERVPABLB-1P60509 514 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 YWHAZP63104 245 aaKnown RBP12.64□□□□□ -0.39
SNX6-209ENST00000557265 PNOCQ13519 176 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 LY6DQ14210 128 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 ZNF284Q2VY69 593 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 RABGAP1LQ5R372 815 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 PIP5KL1Q5T9C9 394 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 TTC39BQ5VTQ0 682 aaPredicted RBP12.64□□□□□ -0.39
SNX6-209ENST00000557265 FBXL22Q6P050 247 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 DENND1BQ6P3S1 775 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 RRAGAQ7L523 313 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 HSCBQ8IWL3 235 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 OR52K2Q8NGK3 314 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 ALG14Q96F25 216 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 APOLD1Q96LR9 279 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 PPP1R9BQ96SB3 815 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 FEM1AQ9BSK4 669 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 CALN1Q9BXU9 219 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 SLC4A5Q9BY07 1137 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 POPDC2Q9HBU9 364 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 FZD3Q9NPG1 666 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.64□□□□□ -0.392e-7■■□□□ 12.7
SNX6-209ENST00000557265 RMND1Q9NWS8 449 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 SLC25A13Q9UJS0 675 aa12.64□□□□□ -0.39
SNX6-209ENST00000557265 HECTD1Q9ULT8 2610 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 SYNJ2BP-COX16A0A087WUM0 186 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.63□□□□□ -0.39
SNX6-209ENST00000557265 LY6G6EA0A0G2JKS1 128 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 A0A1W2PQ27 194 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 A0A1W2PQ64 194 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 TRIM49BA6NDI0 452 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 ALOX15BO15296 676 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 IGLV3-25P01717 112 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 GP1BAP07359 652 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 ALPPL2P10696 532 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 AKT2P31751 481 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 CLDN2P57739 230 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 CENPCQ03188 943 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 VAC14Q08AM6 782 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 ZNF177Q13360 481 aaPredicted RBP12.63□□□□□ -0.39
SNX6-209ENST00000557265 TAF5Q15542 800 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 ZNF542PQ5EBM4 170 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 ZNF658Q5TYW1 1059 aaPredicted RBP12.63□□□□□ -0.39
SNX6-209ENST00000557265 NEK5Q6P3R8 708 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 HORMAD1Q86X24 394 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 ARHGEF19Q8IW93 802 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 FAM181AQ8N9Y4 354 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 LMO3Q8TAP4 145 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 STK32AQ8WU08 396 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 RNF34Q969K3 372 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 CCDC34Q96HJ3 373 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 RPRD1AQ96P16 312 aaPredicted RBP12.63□□□□□ -0.39
SNX6-209ENST00000557265 NOX5Q96PH1 765 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 DPH1Q9BZG8 443 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 METTL14Q9HCE5 456 aaKnown RBP12.63□□□□□ -0.39
SNX6-209ENST00000557265 ASCL3Q9NQ33 180 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 THSD1Q9NS62 852 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 NLGN3Q9NZ94 848 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 COX16Q9P0S2 106 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 VPS28Q9UK41 221 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 U3KQA8 63 aa12.63□□□□□ -0.39
SNX6-209ENST00000557265 NAV2Q8IVL1 2488 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 NEMP2A6NFY4 417 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 B8ZZF3 427 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 E5RJQ4 531 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 PYCARD-AS1I3L0S3 204 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 K7ESM1 405 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 KPNA3O00505 521 aaPredicted RBP12.62□□□□□ -0.39
SNX6-209ENST00000557265 SCAMP1O15126 338 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 PMM2O15305 246 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 NEBLO76041 1014 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 MT-CO1P00395 513 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 CTSLP07711 333 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 SLC2A3P11169 496 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 C6P13671 934 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 HNRNPA2B1P22626 353 aaKnown RBP12.62□□□□□ -0.39
SNX6-209ENST00000557265 CCR1P32246 355 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 DUSP3P51452 185 aaPredicted RBP12.62□□□□□ -0.39
SNX6-209ENST00000557265 IRAK1P51617 712 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 CDK17Q00537 523 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 LRRC63Q05C16 580 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 EIF4EBP2Q13542 120 aaPredicted RBP12.62□□□□□ -0.39
SNX6-209ENST00000557265 AUHQ13825 339 aaKnown RBP12.62□□□□□ -0.39
SNX6-209ENST00000557265 COBLL1Q53SF7 1204 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 Q6ZSR6 202 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 TMEM110Q86TL2 294 aa12.62□□□□□ -0.39
SNX6-209ENST00000557265 SLC22A18ASQ8N1D0 253 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms