RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 POLR3BQ9NW08 1133 aaPredicted RBP10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 NUDT5Q9UKK9 219 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 TSPAN16Q9UKR8 245 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 PCDHGA5Q9Y5G8 931 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 OTOGLQ3ZCN5 2332 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 O00370 1275 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 BIN1O00499 593 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 CACNG3O60359 315 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 STC2O76061 302 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 SETSIPP0DME0 302 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 TYRP14679 529 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 CD19P15391 556 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 SCNN1BP51168 640 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 GCNT1Q02742 428 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 SF1Q15637 639 aaKnown RBP10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 CNGA2Q16280 664 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 GOLGA7BQ2TAP0 167 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 POMZP3Q6PJE2 187 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 TMEM270Q6UE05 265 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 LCLAT1Q6UWP7 414 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 Q6ZNB5 142 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 DGLUCYQ7Z3D6 616 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 KBTBD6Q86V97 674 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 MIB1Q86YT6 1006 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 SCML4Q8N228 414 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 CCDC33Q8N5R6 958 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 ALLCQ8N6M5 410 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 IL17RCQ8NAC3 791 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 TXNDC5Q8NBS9 432 aaKnown RBP10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 RNF214Q8ND24 703 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 CYB5D2Q8WUJ1 264 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 DPH2Q9BQC3 489 aaPredicted RBP10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 OLA1Q9NTK5 396 aaKnown RBP10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 RWDD2AQ9UIY3 292 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 CTNND2Q9UQB3 1225 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 PCDHB4Q9Y5E5 795 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 MYOFQ9NZM1 2061 aa10.25□□□□□ -0.77
HNRNPC-228ENST00000557033 CDC14CA4D256 554 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 NEDD8-MDP1E9PL57 170 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 SGK1O00141 431 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 MDM4O15151 490 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 SHOXO15266 292 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 TMPRSS2O15393 492 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 EPN2O95208 641 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 KLF8O95600 359 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 AFPP02771 609 aaKnown RBP10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 KLKB1P03952 638 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 ZNF806P0C7X5 589 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 ALAS2P22557 587 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 ATXN1P54253 815 aaKnown RBP10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 STX17P56962 302 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 KDSRQ06136 332 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 MESP2Q0VG99 397 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 EFEMP1Q12805 493 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 MAP4K2Q12851 820 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 BYSLQ13895 437 aaKnown RBP10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 SLBPQ14493 270 aaKnown RBP eCLIP10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 ELF2Q15723 593 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 PLK5Q496M5 336 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 PKDCCQ504Y2 493 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 EMC10Q5UCC4 262 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 GRAMD4Q6IC98 578 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 PRR23CQ6ZRP0 262 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 TPGS1Q6ZTW0 290 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 RSRC2Q7L4I2 434 aaKnown RBP10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 MAMDC2Q7Z304 686 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 TERB1Q8NA31 727 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 UBA3Q8TBC4 463 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 SLC35F5Q8WV83 523 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 FAM81BQ96LP2 452 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 CCDC140Q96MF4 163 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 RTKNQ9BST9 563 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 ULBP1Q9BZM6 244 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 DUSP15Q9H1R2 295 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 ARRDC1-AS1Q9H2J1 176 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 CNGB3Q9NQW8 809 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 RAD18Q9NS91 495 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 ABCC13Q9NSE7 274 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 DNAJC17Q9NVM6 304 aaKnown RBP10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 CRIM1Q9NZV1 1036 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 MARCH2Q9P0N8 246 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 RASAL2Q9UJF2 1139 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 FBXO10Q9UK96 956 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 CNTN6Q9UQ52 1028 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 APOBEC2Q9Y235 224 aaKnown RBP10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 EML5Q05BV3 1969 aa10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 EP300Q09472 2414 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-228ENST00000557033 GVINP1Q7Z2Y8 2422 aa10.23□□□□□ -0.77
HNRNPC-228ENST00000557033 SLC12A8A0AV02 714 aa10.23□□□□□ -0.77
HNRNPC-228ENST00000557033 ANTXRLA6NF34 631 aa10.23□□□□□ -0.77
HNRNPC-228ENST00000557033 RNF225M0QZC1 329 aaPredicted RBP10.23□□□□□ -0.77
HNRNPC-228ENST00000557033 TULP2O00295 520 aa10.23□□□□□ -0.77
HNRNPC-228ENST00000557033 IFRD1O00458 451 aaPredicted RBP10.23□□□□□ -0.77
HNRNPC-228ENST00000557033 PENKP01210 267 aaPredicted RBP10.23□□□□□ -0.77
HNRNPC-228ENST00000557033 CISD3P0C7P0 127 aa10.23□□□□□ -0.77
HNRNPC-228ENST00000557033 MX2P20592 715 aa10.23□□□□□ -0.77
HNRNPC-228ENST00000557033 NTSR1P30989 418 aa10.23□□□□□ -0.77
HNRNPC-228ENST00000557033 DGKGP49619 791 aa10.23□□□□□ -0.77
HNRNPC-228ENST00000557033 GFRA1P56159 465 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms