RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 GDE1Q9NZC3 331 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 TBC1D14Q9P2M4 693 aa24.29■■□□□ 1.48
SIX4-203ENST00000556952 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.28■■□□□ 1.48
SIX4-203ENST00000556952 RNF103O00237 685 aa24.28■■□□□ 1.48
SIX4-203ENST00000556952 SCAMP3O14828 347 aaKnown RBP24.28■■□□□ 1.48
SIX4-203ENST00000556952 MAFKO60675 156 aa24.28■■□□□ 1.48
SIX4-203ENST00000556952 ZNF177Q13360 481 aaPredicted RBP24.28■■□□□ 1.48
SIX4-203ENST00000556952 MPPE1Q53F39 396 aa24.28■■□□□ 1.48
SIX4-203ENST00000556952 OTOP3Q7RTS5 596 aa24.28■■□□□ 1.48
SIX4-203ENST00000556952 GJD3Q8N144 294 aa24.28■■□□□ 1.48
SIX4-203ENST00000556952 OTUB2Q96DC9 234 aa24.28■■□□□ 1.48
SIX4-203ENST00000556952 ARFGAP3Q9NP61 516 aa24.28■■□□□ 1.48
SIX4-203ENST00000556952 TPX2Q9ULW0 747 aaKnown RBP24.28■■□□□ 1.48
SIX4-203ENST00000556952 TBC1D30Q9Y2I9 924 aa24.28■■□□□ 1.48
SIX4-203ENST00000556952 TRIOO75962 3097 aa24.27■■□□□ 1.48
SIX4-203ENST00000556952 TBL1XO60907 577 aa24.27■■□□□ 1.48
SIX4-203ENST00000556952 ITGA8P53708 1063 aa24.27■■□□□ 1.48
SIX4-203ENST00000556952 NRLP54845 237 aa24.27■■□□□ 1.48
SIX4-203ENST00000556952 PLTPP55058 493 aa24.27■■□□□ 1.48
SIX4-203ENST00000556952 WASHC5Q12768 1159 aa24.27■■□□□ 1.48
SIX4-203ENST00000556952 ZNF783Q6ZMS7 281 aa24.27■■□□□ 1.48
SIX4-203ENST00000556952 CCDC110Q8TBZ0 833 aa24.27■■□□□ 1.48
SIX4-203ENST00000556952 FBXO25Q8TCJ0 367 aa24.27■■□□□ 1.48
SIX4-203ENST00000556952 FGF13Q92913 245 aa24.27■■□□□ 1.48
SIX4-203ENST00000556952 HMCESQ96FZ2 354 aa24.27■■□□□ 1.48
SIX4-203ENST00000556952 FMO2Q99518 471 aa24.27■■□□□ 1.48
SIX4-203ENST00000556952 NEUROG2Q9H2A3 272 aa24.27■■□□□ 1.48
SIX4-203ENST00000556952 SEPT10Q9P0V9 454 aa24.27■■□□□ 1.48
SIX4-203ENST00000556952 MTRF1LQ9UGC7 380 aaKnown RBP24.27■■□□□ 1.48
SIX4-203ENST00000556952 ANAPC5Q9UJX4 755 aa24.27■■□□□ 1.48
SIX4-203ENST00000556952 ILVBLA1L0T0 632 aa24.26■■□□□ 1.47
SIX4-203ENST00000556952 SMAPO00193 183 aa24.26■■□□□ 1.47
SIX4-203ENST00000556952 MORF4L2Q15014 288 aa24.26■■□□□ 1.47
SIX4-203ENST00000556952 ANO4Q32M45 955 aa24.26■■□□□ 1.47
SIX4-203ENST00000556952 ANKRD20A2Q5SQ80 823 aa24.26■■□□□ 1.47
SIX4-203ENST00000556952 ANKRD20A1Q5TYW2 823 aa24.26■■□□□ 1.47
SIX4-203ENST00000556952 ANKRD20A3Q5VUR7 823 aa24.26■■□□□ 1.47
SIX4-203ENST00000556952 HIBCHQ6NVY1 386 aaPredicted RBP24.26■■□□□ 1.47
SIX4-203ENST00000556952 ARHGEF18Q6ZSZ5 1173 aa24.26■■□□□ 1.47
SIX4-203ENST00000556952 ST13P5Q8NFI4 369 aaPredicted RBP24.26■■□□□ 1.47
SIX4-203ENST00000556952 RIN3Q8TB24 985 aa24.26■■□□□ 1.47
SIX4-203ENST00000556952 DEPDC1BQ8WUY9 529 aa24.26■■□□□ 1.47
SIX4-203ENST00000556952 IPO11Q9UI26 975 aaKnown RBP24.26■■□□□ 1.47
SIX4-203ENST00000556952 TRHDEQ9UKU6 1024 aa24.26■■□□□ 1.47
SIX4-203ENST00000556952 SHOC2Q9UQ13 582 aa24.26■■□□□ 1.47
SIX4-203ENST00000556952 CUL9Q8IWT3 2517 aa24.26■■□□□ 1.47
SIX4-203ENST00000556952 KCNK1O00180 336 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 SLC9A3R1O14745 358 aaPredicted RBP24.25■■□□□ 1.47
SIX4-203ENST00000556952 MATN3O15232 486 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 TP73O15350 636 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 LUC7L3O95232 432 aaKnown RBP24.25■■□□□ 1.47
SIX4-203ENST00000556952 CYBBP04839 570 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 RHOCP08134 193 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 PTPN3P26045 913 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 ETFBP38117 255 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 IFI35P80217 286 aaPredicted RBP24.25■■□□□ 1.47
SIX4-203ENST00000556952 GNA12Q03113 381 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 SERINC3Q13530 473 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 RNASEH2BQ5TBB1 312 aaKnown RBP24.25■■□□□ 1.47
SIX4-203ENST00000556952 ARHGAP36Q6ZRI8 547 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 HOOK3Q86VS8 718 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 PPIL6Q8IXY8 311 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 SMARCD2Q92925 531 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 CAVIN3Q969G5 261 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 ASB16Q96NS5 453 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 CDH7Q9ULB5 785 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 FARP1Q9Y4F1 1045 aaPredicted RBP24.25■■□□□ 1.47
SIX4-203ENST00000556952 KIF26AQ9ULI4 1882 aaPredicted RBP24.25■■□□□ 1.47
SIX4-203ENST00000556952 LAMP2P13473 410 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 BEND6Q5SZJ8 279 aaPredicted RBP24.25■■□□□ 1.47
SIX4-203ENST00000556952 RNF43Q68DV7 783 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 CXorf57Q6NSI4 855 aaKnown RBP24.25■■□□□ 1.47
SIX4-203ENST00000556952 RHBDF2Q6PJF5 856 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 ZNF567Q8N184 647 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 DDI1Q8WTU0 396 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 ARHGEF2Q92974 986 aaKnown RBP24.25■■□□□ 1.47
SIX4-203ENST00000556952 SP110Q9HB58 689 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 OBP2AQ9NY56 170 aa24.25■■□□□ 1.47
SIX4-203ENST00000556952 KLHL8Q9P2G9 620 aaPredicted RBP24.25■■□□□ 1.47
SIX4-203ENST00000556952 FDFT1P37268 417 aa24.24■■□□□ 1.47
SIX4-203ENST00000556952 BASP1P80723 227 aaKnown RBP24.24■■□□□ 1.47
SIX4-203ENST00000556952 IL10RBQ08334 325 aa24.24■■□□□ 1.47
SIX4-203ENST00000556952 TEX44Q53QW1 395 aa24.24■■□□□ 1.47
SIX4-203ENST00000556952 ZNF354CQ86Y25 554 aa24.24■■□□□ 1.47
SIX4-203ENST00000556952 MAML1Q92585 1016 aa24.24■■□□□ 1.47
SIX4-203ENST00000556952 FOXP3Q9BZS1 431 aa24.24■■□□□ 1.47
SIX4-203ENST00000556952 TSPYL1Q9H0U9 437 aa24.24■■□□□ 1.47
SIX4-203ENST00000556952 TRPV4Q9HBA0 871 aa24.24■■□□□ 1.47
SIX4-203ENST00000556952 RAB6BQ9NRW1 208 aa24.24■■□□□ 1.47
SIX4-203ENST00000556952 EPS15L1Q9UBC2 864 aa24.24■■□□□ 1.47
SIX4-203ENST00000556952 H0Y626 953 aa24.23■■□□□ 1.47
SIX4-203ENST00000556952 CHADO15335 359 aa24.23■■□□□ 1.47
SIX4-203ENST00000556952 CCNB1P14635 433 aa24.23■■□□□ 1.47
SIX4-203ENST00000556952 HOXD9P28356 352 aaPredicted RBP24.23■■□□□ 1.47
SIX4-203ENST00000556952 CDH18Q13634 790 aa24.23■■□□□ 1.47
SIX4-203ENST00000556952 FAM78AQ5JUQ0 283 aa24.23■■□□□ 1.47
SIX4-203ENST00000556952 ITPRIPL1Q6GPH6 555 aa24.23■■□□□ 1.47
SIX4-203ENST00000556952 RNF135Q8IUD6 432 aa24.23■■□□□ 1.47
SIX4-203ENST00000556952 CCDC117Q8IWD4 279 aaPredicted RBP24.23■■□□□ 1.47
SIX4-203ENST00000556952 CARNMT1Q8N4J0 409 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms