RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 ATMQ13315 3056 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 A0A1B0GVM2 712 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 A0A1W2PQU0 124 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 TCAF2A6NFQ2 919 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 NEMP2A6NFY4 417 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 ALOX15BO15296 676 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 FFAR2O15552 330 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 KLK10O43240 276 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 IGLV3-25P01717 112 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 GP1BAP07359 652 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 SLC2A3P11169 496 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 AKT2P31751 481 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 DUSP3P51452 185 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-223ENST00000556689 PMS1P54277 932 aaKnown RBP13.01□□□□□ -0.33
SHMT2-223ENST00000556689 TAS2R38P59533 333 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 YWHAZP63104 245 aaKnown RBP13.01□□□□□ -0.33
SHMT2-223ENST00000556689 CETN1Q12798 172 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 EIF4EBP2Q13542 120 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-223ENST00000556689 COBLL1Q53SF7 1204 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 ZNF658Q5TYW1 1059 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-223ENST00000556689 CXorf57Q6NSI4 855 aaKnown RBP13.01□□□□□ -0.33
SHMT2-223ENST00000556689 RRAGAQ7L523 313 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 TMEM145Q8NBT3 493 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 STK32AQ8WU08 396 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 KCNE4Q8WWG9 221 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 KLK6Q92876 244 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 KAT5Q92993 513 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 ALG14Q96F25 216 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 MYOCQ99972 504 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 FEM1AQ9BSK4 669 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 DPH1Q9BZG8 443 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 OSBPL2Q9H1P3 480 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 THAP9Q9H5L6 903 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 POLR1BQ9H9Y6 1135 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 EVA1BQ9NVM1 165 aa13.01□□□□□ -0.33
SHMT2-223ENST00000556689 PTPRQQ9UMZ3 2332 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 MYLKQ15746 1914 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13□□□□□ -0.33
SHMT2-223ENST00000556689 SCAMP1O15126 338 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 BNIP3LO60238 219 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 CSO75390 466 aaKnown RBP13□□□□□ -0.33
SHMT2-223ENST00000556689 PIAS2O75928 621 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 GIMD1P0DJR0 217 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 PRLRP16471 622 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 HNRNPA2B1P22626 353 aaKnown RBP13□□□□□ -0.33
SHMT2-223ENST00000556689 CCR1P32246 355 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 LRRC63Q05C16 580 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 ZNF177Q13360 481 aaPredicted RBP13□□□□□ -0.33
SHMT2-223ENST00000556689 PNOCQ13519 176 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 ZNF284Q2VY69 593 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 FBXL22Q6P050 247 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 Q6ZVU0 165 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 TMEM110Q86TL2 294 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 SH2D3CQ8N5H7 860 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 FAM181AQ8N9Y4 354 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 OR13H1Q8NG92 308 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 RNF34Q969K3 372 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 IFT43Q96FT9 208 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 APOLD1Q96LR9 279 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 RPRD1AQ96P16 312 aaPredicted RBP13□□□□□ -0.33
SHMT2-223ENST00000556689 GSDMAQ96QA5 445 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 DUSP23Q9BVJ7 150 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 CALN1Q9BXU9 219 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 SLC4A5Q9BY07 1137 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 GOLPH3LQ9H4A5 285 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 USP29Q9HBJ7 922 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 THSD1Q9NS62 852 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 NLGN3Q9NZ94 848 aa13□□□□□ -0.33
SHMT2-223ENST00000556689 ARID1BQ8NFD5 2236 aaPredicted RBP13□□□□□ -0.33
SHMT2-223ENST00000556689 B8ZZF3 427 aa12.99□□□□□ -0.33
SHMT2-223ENST00000556689 P4HA2O15460 535 aa12.99□□□□□ -0.33
SHMT2-223ENST00000556689 MED7O43513 233 aa12.99□□□□□ -0.33
SHMT2-223ENST00000556689 MYF5P13349 255 aa12.99□□□□□ -0.33
SHMT2-223ENST00000556689 PITX1P78337 314 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-223ENST00000556689 CDK17Q00537 523 aa12.99□□□□□ -0.33
SHMT2-223ENST00000556689 GCNT1Q02742 428 aa12.99□□□□□ -0.33
SHMT2-223ENST00000556689 VAC14Q08AM6 782 aa12.99□□□□□ -0.33
SHMT2-223ENST00000556689 AUHQ13825 339 aaKnown RBP12.99□□□□□ -0.33
SHMT2-223ENST00000556689 PIP5KL1Q5T9C9 394 aa12.99□□□□□ -0.33
SHMT2-223ENST00000556689 DENND1BQ6P3S1 775 aa12.99□□□□□ -0.33
SHMT2-223ENST00000556689 HORMAD1Q86X24 394 aa12.99□□□□□ -0.33
SHMT2-223ENST00000556689 DCP2Q8IU60 420 aaKnown RBP12.99□□□□□ -0.33
SHMT2-223ENST00000556689 OR52K2Q8NGK3 314 aa12.99□□□□□ -0.33
SHMT2-223ENST00000556689 LMO3Q8TAP4 145 aa12.99□□□□□ -0.33
SHMT2-223ENST00000556689 FAM174AQ8TBP5 190 aa12.99□□□□□ -0.33
SHMT2-223ENST00000556689 CCDC114Q96M63 670 aa12.99□□□□□ -0.33
SHMT2-223ENST00000556689 SCAND2PQ9GZW5 306 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-223ENST00000556689 FZD3Q9NPG1 666 aa12.99□□□□□ -0.33
SHMT2-223ENST00000556689 DYRK4Q9NR20 520 aa12.99□□□□□ -0.33
SHMT2-223ENST00000556689 DDIT4Q9NX09 232 aa12.99□□□□□ -0.33
SHMT2-223ENST00000556689 VPS28Q9UK41 221 aa12.99□□□□□ -0.33
SHMT2-223ENST00000556689 OR51B4Q9Y5P0 310 aa12.99□□□□□ -0.33
SHMT2-223ENST00000556689 SYNJ2BP-COX16A0A087WUM0 186 aa12.98□□□□□ -0.33
SHMT2-223ENST00000556689 TRIM49BA6NDI0 452 aa12.98□□□□□ -0.33
SHMT2-223ENST00000556689 E5RJQ4 531 aa12.98□□□□□ -0.33
SHMT2-223ENST00000556689 K7ESM1 405 aa12.98□□□□□ -0.33
SHMT2-223ENST00000556689 KPNA3O00505 521 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-223ENST00000556689 PCDH8O95206 1070 aa12.98□□□□□ -0.33
SHMT2-223ENST00000556689 KRT5P13647 590 aa12.98□□□□□ -0.33
SHMT2-223ENST00000556689 C6P13671 934 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms