RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 KRT37O76014 449 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 TIMP1P01033 207 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 SNRPAP09012 282 aaKnown RBP18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 TAC1P20366 129 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 AFMIDQ63HM1 303 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 RFWD3Q6PCD5 774 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 FAM43BQ6ZT52 329 aaPredicted RBP18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 IPMKQ8NFU5 416 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 ZNF461Q8TAF7 563 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 KLHL5Q96PQ7 755 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 GLOD4Q9HC38 313 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 BFARQ9NZS9 450 aa18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 AFF4Q9UHB7 1163 aaKnown RBP18.68■□□□□ 0.58
SDR39U1-220ENST00000556548 KIF1CO43896 1103 aaKnown RBP18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 ZNF189O75820 626 aaPredicted RBP18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 CSPG5O95196 566 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 POLBP06746 335 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 SPATA31D3P0C874 917 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 RHOQP17081 205 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 DNAJC3Q13217 504 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 TAF12Q16514 161 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 SPATA31D4Q6ZUB0 917 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 ZNF669Q96BR6 464 aaPredicted RBP18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 IL12RB2Q99665 862 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 TTLL2Q9BWV7 592 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 CHRAC1Q9NRG0 131 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 PSAT1Q9Y617 370 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 GREB1Q4ZG55 1949 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 HMX2A2RU54 273 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 PMPCBO75439 489 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 IGLV3-27P01718 113 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 ATP5C1P36542 298 aaKnown RBP18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 DSG1Q02413 1049 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 PLD1Q13393 1074 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 RNF187Q5TA31 235 aaPredicted RBP18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 PABPC5Q96DU9 382 aaKnown RBP18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 MFSD3Q96ES6 412 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 SLC13A1Q9BZW2 595 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 ATXN3LQ9H3M9 355 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 LRRC40Q9H9A6 602 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 TMEM248Q9NWD8 314 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 COMMD8Q9NX08 183 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 DNMT3LQ9UJW3 386 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 ZNF180Q9UJW8 692 aa18.67■□□□□ 0.58
SDR39U1-220ENST00000556548 TTC24A2A3L6 582 aaPredicted RBP18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 ZNF840PA6NDX5 716 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 WASH4PA8MWX3 477 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 ALDH1A2O94788 518 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 HMGA1P17096 107 aaKnown RBP18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 RFC2P35250 354 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 MAXP61244 160 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 ZNF33AQ06730 810 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 FBXO46Q6PJ61 603 aaPredicted RBP18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 SH2D5Q6ZV89 423 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 PIGWQ7Z7B1 504 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 RASSF3Q86WH2 238 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 PSMG2Q969U7 264 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 THOC1Q96FV9 657 aaKnown RBP18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 YME1L1Q96TA2 773 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 NSRP1Q9H0G5 558 aaKnown RBP18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 GKN1Q9NS71 199 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 NYNRINQ9P2P1 1898 aaKnown RBP18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 ERI2A8K979 691 aaKnown RBP18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 COCHO43405 550 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 ABLIM3O94929 683 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 ZWINTO95229 277 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 ALDH1A3P47895 512 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 ITKQ08881 620 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 LGSNQ5TDP6 509 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 TIGD7Q6NT04 549 aaPredicted RBP18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 CDHR3Q6ZTQ4 885 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 LGI2Q8N0V4 545 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 UMODL1-AS1Q8N2C9 162 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 CCDC197Q8NCU1 140 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 FAM111AQ96PZ2 611 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 RC3H2Q9HBD1 1191 aaKnown RBP18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 PPARGC1AQ9UBK2 798 aaKnown RBP18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 YIPF1Q9Y548 306 aa18.66■□□□□ 0.58
SDR39U1-220ENST00000556548 IGLV3-10A0A075B6K4 115 aa18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 PRRG1O14668 218 aa18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 SCAMP3O14828 347 aaKnown RBP18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 RFPL1O75677 317 aa18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 KRT38O76015 456 aa18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 IRF1P10914 325 aa18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 TACR2P21452 398 aa18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 OR1E1P30953 314 aa18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 SLC18A1P54219 525 aa18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 NIPAL4Q0D2K0 466 aa18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 PCSK7Q16549 785 aa18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 CCNJLQ8IV13 435 aa18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 TTC17Q96AE7 1141 aa18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 ZNF778Q96MU6 729 aa18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 FICDQ9BVA6 458 aa18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 SSU72Q9NP77 194 aaKnown RBP18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 NT5MQ9NPB1 228 aa18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 SLCO1B3Q9NPD5 702 aa18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 SPG21Q9NZD8 308 aa18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 C2orf78A6NCI8 922 aa18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 GOLGA8TH3BQL2 631 aa18.65■□□□□ 0.58
SDR39U1-220ENST00000556548 URODP06132 367 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms