RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 ZNF852Q6ZMS4 543 aa17.81■□□□□ 0.44
TUBB3-211ENST00000556536 RASGEF1CQ8N431 466 aa17.81■□□□□ 0.44
TUBB3-211ENST00000556536 WFIKKN2Q8TEU8 576 aa17.81■□□□□ 0.44
TUBB3-211ENST00000556536 FAM118BQ9BPY3 351 aa17.81■□□□□ 0.44
TUBB3-211ENST00000556536 IRF2BPLQ9H1B7 796 aa17.81■□□□□ 0.44
TUBB3-211ENST00000556536 ATP13A1Q9HD20 1204 aa17.81■□□□□ 0.44
TUBB3-211ENST00000556536 HCN2Q9UL51 889 aa17.81■□□□□ 0.44
TUBB3-211ENST00000556536 R3HDM2Q9Y2K5 976 aaKnown RBP17.81■□□□□ 0.44
TUBB3-211ENST00000556536 SAR1BQ9Y6B6 198 aa17.81■□□□□ 0.44
TUBB3-211ENST00000556536 CACNA1AO00555 2505 aa17.81■□□□□ 0.44
TUBB3-211ENST00000556536 MYOFQ9NZM1 2061 aa17.81■□□□□ 0.44
TUBB3-211ENST00000556536 ARHGAP42A6NI28 874 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 K7EQS6 105 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 CES2O00748 559 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 GFRA3O60609 400 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 ZMPSTE24O75844 475 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 STARD6P59095 220 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 SIGLEC14Q08ET2 396 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 GALNT2Q10471 571 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 GRSF1Q12849 480 aaKnown RBP eCLIP17.8■□□□□ 0.44
TUBB3-211ENST00000556536 DMC1Q14565 340 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 PREPLQ4J6C6 727 aaPredicted RBP17.8■□□□□ 0.44
TUBB3-211ENST00000556536 CCDC181Q5TID7 509 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 LEKR1Q6ZMV7 388 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 B4GALNT4Q76KP1 1039 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 ZNF354CQ86Y25 554 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 ZNF687Q8N1G0 1237 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 DCAF4L2Q8NA75 395 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 ZNF592Q92610 1267 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 TTC17Q96AE7 1141 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 OLFM3Q96PB7 478 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 CIPCQ9C0C6 399 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 ELOVL2Q9NXB9 296 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 VPS51Q9UID3 782 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 NDRG2Q9UN36 371 aaKnown RBP17.8■□□□□ 0.44
TUBB3-211ENST00000556536 MTF2Q9Y483 593 aaPredicted RBP17.8■□□□□ 0.44
TUBB3-211ENST00000556536 ACTL7AQ9Y615 435 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 KMT2EQ8IZD2 1858 aa17.8■□□□□ 0.44
TUBB3-211ENST00000556536 J3KR12 359 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 APOC4-APOC2K7ER74 178 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 KIF2AO00139 706 aaPredicted RBP17.79■□□□□ 0.44
TUBB3-211ENST00000556536 CBX4O00257 560 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 KDELR3O43731 214 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 APOC2P02655 101 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 TUBB4AP04350 444 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 POLR2EP19388 210 aaKnown RBP17.79■□□□□ 0.44
TUBB3-211ENST00000556536 DRD1P21728 446 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 ETFBP38117 255 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 TNFRSF4P43489 277 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 NR2C2P49116 596 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 FOXK2Q01167 660 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 OTUD4Q01804 1114 aaKnown RBP17.79■□□□□ 0.44
TUBB3-211ENST00000556536 SIX1Q15475 284 aaPredicted RBP17.79■□□□□ 0.44
TUBB3-211ENST00000556536 LONRF2Q1L5Z9 754 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 EMC10Q5UCC4 262 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 LINGO4Q6UY18 593 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 CREG2Q8IUH2 290 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 ACTL9Q8TC94 416 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 CYB5D2Q8WUJ1 264 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 P3H4Q92791 437 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 EXOC4Q96A65 974 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 SHDQ96IW2 340 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 CAPZA3Q96KX2 299 aa17.79■□□□□ 0.44
TUBB3-211ENST00000556536 C2orf49Q9BVC5 232 aaPredicted RBP17.79■□□□□ 0.44
TUBB3-211ENST00000556536 IPO11Q9UI26 975 aaKnown RBP17.79■□□□□ 0.44
TUBB3-211ENST00000556536 TTC7AQ9ULT0 858 aaPredicted RBP17.79■□□□□ 0.44
TUBB3-211ENST00000556536 ZNF500O60304 480 aaPredicted RBP17.78■□□□□ 0.44
TUBB3-211ENST00000556536 MAFKO60675 156 aa17.78■□□□□ 0.44
TUBB3-211ENST00000556536 CHRM1P11229 460 aaPredicted RBP17.78■□□□□ 0.44
TUBB3-211ENST00000556536 TARSP26639 723 aaKnown RBP17.78■□□□□ 0.44
TUBB3-211ENST00000556536 GARSP41250 739 aaKnown RBP17.78■□□□□ 0.44
TUBB3-211ENST00000556536 STK19P49842 368 aaPredicted RBP17.78■□□□□ 0.44
TUBB3-211ENST00000556536 SEC13P55735 322 aa17.78■□□□□ 0.44
TUBB3-211ENST00000556536 ARF5P84085 180 aa17.78■□□□□ 0.44
TUBB3-211ENST00000556536 NOMO1Q15155 1222 aa17.78■□□□□ 0.44
TUBB3-211ENST00000556536 ATPAF2Q8N5M1 289 aa17.78■□□□□ 0.44
TUBB3-211ENST00000556536 ACTRT1Q8TDG2 376 aa17.78■□□□□ 0.44
TUBB3-211ENST00000556536 ATG4AQ8WYN0 398 aa17.78■□□□□ 0.44
TUBB3-211ENST00000556536 MRGPRX3Q96LB0 322 aa17.78■□□□□ 0.44
TUBB3-211ENST00000556536 LGMNQ99538 433 aa17.78■□□□□ 0.44
TUBB3-211ENST00000556536 FOXQ1Q9C009 403 aa17.78■□□□□ 0.44
TUBB3-211ENST00000556536 TBC1D17Q9HA65 648 aa17.78■□□□□ 0.44
TUBB3-211ENST00000556536 PDFQ9HBH1 243 aa17.78■□□□□ 0.44
TUBB3-211ENST00000556536 LTB4R2Q9NPC1 389 aa17.78■□□□□ 0.44
TUBB3-211ENST00000556536 ZDHHC4Q9NPG8 344 aa17.78■□□□□ 0.44
TUBB3-211ENST00000556536 RBM12Q9NTZ6 932 aaKnown RBP17.78■□□□□ 0.44
TUBB3-211ENST00000556536 RAD54BQ9Y620 910 aa17.78■□□□□ 0.44
TUBB3-211ENST00000556536 DOCK4Q8N1I0 1966 aa17.77■□□□□ 0.44
TUBB3-211ENST00000556536 KANSL1LA0AUZ9 987 aa17.77■□□□□ 0.44
TUBB3-211ENST00000556536 PGRMC1O00264 195 aaKnown RBP17.77■□□□□ 0.44
TUBB3-211ENST00000556536 TIMM44O43615 452 aa17.77■□□□□ 0.44
TUBB3-211ENST00000556536 PRAMEF11O60813 436 aa17.77■□□□□ 0.44
TUBB3-211ENST00000556536 CD160O95971 181 aa17.77■□□□□ 0.44
TUBB3-211ENST00000556536 MT-CO1P00395 513 aa17.77■□□□□ 0.44
TUBB3-211ENST00000556536 MX2P20592 715 aa17.77■□□□□ 0.44
TUBB3-211ENST00000556536 ECT2LQ008S8 904 aa17.77■□□□□ 0.44
TUBB3-211ENST00000556536 CCINQ13939 588 aa17.77■□□□□ 0.44
TUBB3-211ENST00000556536 UBXN2BQ14CS0 331 aa17.77■□□□□ 0.44
TUBB3-211ENST00000556536 EIF4HQ15056 248 aaKnown RBP17.77■□□□□ 0.44
TUBB3-211ENST00000556536 PDK1Q15118 436 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms