RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ISCUQ9H1K1 167 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 RSPH9Q9H1X1 276 aaPredicted RBP11.84□□□□□ -0.51
SLIRP-205ENST00000556310 MTG2Q9H4K7 406 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 RETREG1Q9H6L5 497 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 CNOT8Q9UFF9 292 aaKnown RBP11.84□□□□□ -0.51
SLIRP-205ENST00000556310 OR12D3Q9UGF7 316 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 SLCO3A1Q9UIG8 710 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 SLC25A13Q9UJS0 675 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 NEU3Q9UQ49 428 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.84□□□□□ -0.51
SLIRP-205ENST00000556310 SCINQ9Y6U3 715 aa11.84□□□□□ -0.51
SLIRP-205ENST00000556310 ILVBLA1L0T0 632 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 RNASEH1O60930 286 aaKnown RBP11.83□□□□□ -0.52
SLIRP-205ENST00000556310 NDUFS2O75306 463 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 LRIG2O94898 1065 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 DNTTP04053 509 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 PSMA2P25787 234 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 OR1E1P30953 314 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 HNRNPH3P31942 346 aaKnown RBP11.83□□□□□ -0.52
SLIRP-205ENST00000556310 CASP14P31944 242 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 NUMBP49757 651 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 KRT83P78385 493 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 ELAVL3Q14576 367 aaKnown RBP11.83□□□□□ -0.52
SLIRP-205ENST00000556310 SF3A2Q15428 464 aaKnown RBP11.83□□□□□ -0.52
SLIRP-205ENST00000556310 C9orf64Q5T6V5 341 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 PEAR1Q5VY43 1037 aaPredicted RBP11.83□□□□□ -0.52
SLIRP-205ENST00000556310 SLFN11Q7Z7L1 901 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 DNAAF5Q86Y56 855 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 SYT12Q8IV01 421 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 NETO1Q8TDF5 533 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 FRS2Q8WU20 508 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 TBC1D31Q96DN5 1066 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 TOE1Q96GM8 510 aaKnown RBP11.83□□□□□ -0.52
SLIRP-205ENST00000556310 PSMB7Q99436 277 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 WSB2Q9NYS7 404 aaPredicted RBP11.83□□□□□ -0.52
SLIRP-205ENST00000556310 ADAMTS1Q9UHI8 967 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 VPS51Q9UID3 782 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 SCML1Q9UN30 329 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 HS3ST2Q9Y278 367 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 CACNA1EQ15878 2313 aa11.83□□□□□ -0.52
SLIRP-205ENST00000556310 TMEM191CA6NGB0 347 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 FAM72CH0Y354 149 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 ATP9BO43861 1147 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 PLEKP08567 350 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-205ENST00000556310 RHOQP17081 205 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 SDHBP21912 280 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 ITPKAP23677 461 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 L1CAMP32004 1257 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 ETFBP38117 255 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 MAPKAPK2P49137 400 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 ZNF33AQ06730 810 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 ZNF252P-AS1Q0IIN9 211 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 AASDHQ4L235 1098 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-205ENST00000556310 FAM72AQ5TYM5 149 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 FAM72DQ6L9T8 149 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 RWDD4Q6NW29 188 aaKnown RBP11.82□□□□□ -0.52
SLIRP-205ENST00000556310 SCYL2Q6P3W7 929 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 NLRP14Q86W24 1093 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 FAM72BQ86X60 149 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 SLC41A1Q8IVJ1 513 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 VSTM4Q8IW00 320 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 DRC7Q8IY82 874 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 SH2D3CQ8N5H7 860 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 PIGKQ92643 395 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 PTPRN2Q92932 1015 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 FOXJ1Q92949 421 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 RMDN1Q96DB5 314 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 ZNF419Q96HQ0 510 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-205ENST00000556310 HSPA12BQ96MM6 686 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 DNAJC7Q99615 494 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.82□□□□□ -0.52
SLIRP-205ENST00000556310 PCED1AQ9H1Q7 454 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 PABPC3Q9H361 631 aaKnown RBP11.82□□□□□ -0.52
SLIRP-205ENST00000556310 SMOC1Q9H4F8 434 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 MRPL47Q9HD33 250 aaKnown RBP11.82□□□□□ -0.52
SLIRP-205ENST00000556310 TMEM248Q9NWD8 314 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 ARHGAP20Q9P2F6 1191 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 EVLQ9UI08 416 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-205ENST00000556310 CDV3Q9UKY7 258 aaKnown RBP11.82□□□□□ -0.52
SLIRP-205ENST00000556310 FZD10Q9ULW2 581 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 DNAH14Q0VDD8 3507 aa11.82□□□□□ -0.52
SLIRP-205ENST00000556310 ATXN2Q99700 1313 aaKnown RBP11.82□□□□□ -0.52
SLIRP-205ENST00000556310 PCDH15Q96QU1 1955 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 A0A087X0T9 212 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 A0A0D9SEW6 157 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.81□□□□□ -0.52
SLIRP-205ENST00000556310 SNAP91O60641 907 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 ADH1BP00325 375 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 TPM1P09493 284 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 FAM228BP0C875 321 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 SRCP12931 536 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 VAV1P15498 845 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 ID4P47928 161 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 GNA12Q03113 381 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 SFSWAPQ12872 951 aaKnown RBP11.81□□□□□ -0.52
SLIRP-205ENST00000556310 SEMA3BQ13214 749 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 CST6Q15828 149 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 RSPO4Q2I0M5 234 aaPredicted RBP11.81□□□□□ -0.52
SLIRP-205ENST00000556310 TCEAL6Q6IPX3 200 aa11.81□□□□□ -0.52
SLIRP-205ENST00000556310 SARM1Q6SZW1 724 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms