RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 DEFB106AQ8N104 65 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 ATP6V0D2Q8N8Y2 350 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 STK32AQ8WU08 396 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 GATA6Q92908 595 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 TTC17Q96AE7 1141 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 BIRC7Q96CA5 298 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 PKNOX2Q96KN3 472 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 PPP1R13BQ96KQ4 1090 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 LMLNQ96KR4 655 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 RPL10LQ96L21 214 aaKnown RBP6.91□□□□□ -1.3
PSEN1-216ENST00000556066 FAM81BQ96LP2 452 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 NOX5Q96PH1 765 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 CPXM1Q96SM3 734 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 OMDQ99983 421 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 PCED1AQ9H1Q7 454 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 RSPH9Q9H1X1 276 aaPredicted RBP6.91□□□□□ -1.3
PSEN1-216ENST00000556066 PDCL3Q9H2J4 239 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 PABPC3Q9H361 631 aaKnown RBP6.91□□□□□ -1.3
PSEN1-216ENST00000556066 SGK2Q9HBY8 427 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 TM9SF3Q9HD45 589 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 TM7SF3Q9NS93 570 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.91□□□□□ -1.3
PSEN1-216ENST00000556066 TMEM63CQ9P1W3 806 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 SLCO3A1Q9UIG8 710 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 ERVW-1Q9UQF0 538 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 FNDC3AQ9Y2H6 1198 aaKnown RBP6.91□□□□□ -1.3
PSEN1-216ENST00000556066 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.91□□□□□ -1.3
PSEN1-216ENST00000556066 PLXNB3Q9ULL4 1909 aa6.91□□□□□ -1.3
PSEN1-216ENST00000556066 TDRD6O60522 2096 aaKnown RBP6.91□□□□□ -1.3
PSEN1-216ENST00000556066 EDDM13A0A1B0GTR0 161 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 A0A1W2PP55 124 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 KCNU1A8MYU2 1149 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 FOXN3O00409 490 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-216ENST00000556066 KCNK3O14649 394 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 MID1O15344 667 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 TPD52L2O43399 206 aaKnown RBP6.9□□□□□ -1.3
PSEN1-216ENST00000556066 LILRA1O75019 489 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 RNASEH2AO75792 299 aaKnown RBP6.9□□□□□ -1.3
PSEN1-216ENST00000556066 TRIM16O95361 564 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 IL1BP01584 269 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 SRPRAP08240 638 aaKnown RBP6.9□□□□□ -1.3
PSEN1-216ENST00000556066 FTH1P19P0C7X4 201 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 PNMA6AP0CW24 399 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-216ENST00000556066 VSIG8P0DPA2 414 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 SLC2A3P11169 496 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 PDGFRAP16234 1089 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 CD27P26842 260 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 CCR1P32246 355 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 SLC8A1P32418 973 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 NNMTP40261 264 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 PSMD8P48556 350 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 STK19P49842 368 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-216ENST00000556066 ATP1A2P50993 1020 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 RNASE9P60153 205 aaKnown RBP6.9□□□□□ -1.3
PSEN1-216ENST00000556066 BNC1Q01954 994 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 SFSWAPQ12872 951 aaKnown RBP6.9□□□□□ -1.3
PSEN1-216ENST00000556066 RAPGEF1Q13905 1077 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 ELOAQ14241 798 aaKnown RBP6.9□□□□□ -1.3
PSEN1-216ENST00000556066 CST6Q15828 149 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 MEA1Q16626 185 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 MAN2A1Q16706 1144 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 ZNF423Q2M1K9 1284 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 KIF19Q2TAC6 998 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 ACCSLQ4AC99 568 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 CCDC157Q569K6 752 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 EFHC1Q5JVL4 640 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 RABGAP1LQ5R372 815 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 KIAA0895LQ68EN5 471 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 MRPL14Q6P1L8 145 aaKnown RBP6.9□□□□□ -1.3
PSEN1-216ENST00000556066 NCEH1Q6PIU2 408 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 C11orf57Q6ZUT1 292 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-216ENST00000556066 FAM183BPQ6ZVS7 135 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 BEND5Q7L4P6 421 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 SLC47A2Q86VL8 602 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 IRF2BP1Q8IU81 584 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 FAM114A1Q8IWE2 563 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 CCAR2Q8N163 923 aaKnown RBP6.9□□□□□ -1.3
PSEN1-216ENST00000556066 STK40Q8N2I9 435 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 WDTC1Q8N5D0 677 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 MLKLQ8NB16 471 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 C1orf131Q8NDD1 294 aaKnown RBP6.9□□□□□ -1.3
PSEN1-216ENST00000556066 C1orf216Q8TAB5 229 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 RHBDD1Q8TEB9 315 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 ZCCHC14Q8WYQ9 949 aaKnown RBP6.9□□□□□ -1.3
PSEN1-216ENST00000556066 SHC3Q92529 594 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 MYO19Q96H55 970 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 MRGPRX3Q96LB0 322 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 RPRD1AQ96P16 312 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-216ENST00000556066 SIK2Q9H0K1 926 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 NEUROG2Q9H2A3 272 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 PLCB1Q9NQ66 1216 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 PGPEP1Q9NXJ5 209 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 SERGEFQ9UGK8 458 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 DNAJC12Q9UKB3 198 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 AJAP1Q9UKB5 411 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-216ENST00000556066 VANGL2Q9ULK5 521 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 APOBEC2Q9Y235 224 aaKnown RBP6.9□□□□□ -1.3
PSEN1-216ENST00000556066 ANKRD6Q9Y2G4 727 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 MSRB2Q9Y3D2 182 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 NEUROG3Q9Y4Z2 214 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms