RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 A0A0D9SEW6 157 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 FAM187AA6NFU0 413 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 CACNG3O60359 315 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 NEBLO76041 1014 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 IFNB1P01574 187 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 RBL1P28749 1068 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 ACTN2P35609 894 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 ACVRL1P37023 503 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 TNK2Q07912 1038 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 SLC12A1Q13621 1099 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 RUNX3Q13761 415 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 AAK1Q2M2I8 961 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 ITPRIPL2Q3MIP1 535 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 FSCBQ5H9T9 825 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 B4GALNT4Q76KP1 1039 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 NAT16Q8N8M0 369 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 FAM71DQ8N9W8 422 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 OR7D4Q8NG98 312 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 CCHCR1Q8TD31 782 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 CSGALNACT1Q8TDX6 532 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 HTR3CQ8WXA8 447 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 UBXN4Q92575 508 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 FEM1AQ9BSK4 669 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 RPP25Q9BUL9 199 aaKnown RBP11.28□□□□□ -0.6
TMEM260-208ENST00000555905 C10orf88Q9H8K7 445 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 ATP13A1Q9HD20 1204 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 HPS4Q9NQG7 708 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 ABCB8Q9NUT2 735 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 SEPT10Q9P0V9 454 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 IGSF9Q9P2J2 1179 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 VPS28Q9UK41 221 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 XIRP2A4UGR9 3374 aa11.28□□□□□ -0.6
TMEM260-208ENST00000555905 EYSQ5T1H1 3165 aa11.27□□□□□ -0.6
TMEM260-208ENST00000555905 C2orf72A6NCS6 295 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 CBX4O00257 560 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 MATN3O15232 486 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 TTI1O43156 1089 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 RAD51CO43502 376 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 KDELR3O43731 214 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 MAFKO60675 156 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 PRAMEF11O60813 436 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 KRT14P02533 472 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 MZF1P28698 734 aaPredicted RBP11.27□□□□□ -0.61
TMEM260-208ENST00000555905 CSKP41240 450 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 PTGIRP43119 386 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 TFF2Q03403 129 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 IL10RBQ08334 325 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 LMAN2Q12907 356 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 DMC1Q14565 340 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 PREPLQ4J6C6 727 aaPredicted RBP11.27□□□□□ -0.61
TMEM260-208ENST00000555905 C4orf22Q6V702 233 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 ARHGAP36Q6ZRI8 547 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 JAMLQ86YT9 394 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 OR52K2Q8NGK3 314 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 WFDC5Q8TCV5 224 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 LRRN4Q8WUT4 740 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 FATE1Q969F0 183 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 P2RY11Q96G91 374 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 ZNF599Q96NL3 588 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 VAT1Q99536 393 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 LRRC1Q9BTT6 524 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 C2orf49Q9BVC5 232 aaPredicted RBP11.27□□□□□ -0.61
TMEM260-208ENST00000555905 ACE2Q9BYF1 805 aaPredicted RBP11.27□□□□□ -0.61
TMEM260-208ENST00000555905 RAB17Q9H0T7 212 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 KCNK12Q9HB15 430 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 USP29Q9HBJ7 922 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 PCDH9Q9HC56 1237 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 DNAJC17Q9NVM6 304 aaKnown RBP11.27□□□□□ -0.61
TMEM260-208ENST00000555905 HAUS2Q9NVX0 235 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 GGA2Q9UJY4 613 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 CLEC4EQ9ULY5 219 aa11.27□□□□□ -0.61
TMEM260-208ENST00000555905 UTP11Q9Y3A2 253 aaKnown RBP11.27□□□□□ -0.61
TMEM260-208ENST00000555905 C5orf60A6NFR6 353 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 ZSCAN5CA6NGD5 496 aaPredicted RBP11.26□□□□□ -0.61
TMEM260-208ENST00000555905 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.26□□□□□ -0.61
TMEM260-208ENST00000555905 J3KR12 359 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 KCNK1O00180 336 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 RNF103O00237 685 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 OPHN1O60890 802 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 GCATO75600 419 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 RHOXF2BP0C7M4 288 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 PABPC1P11940 636 aaKnown RBP11.26□□□□□ -0.61
TMEM260-208ENST00000555905 CCNB1P14635 433 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 VAV1P15498 845 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 HLA-FP30511 346 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 CD70P32970 193 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 DGKGP49619 791 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 RENBPP51606 427 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 PLK1P53350 603 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 GEMIN4P57678 1058 aaKnown RBP11.26□□□□□ -0.61
TMEM260-208ENST00000555905 IFI35P80217 286 aaPredicted RBP11.26□□□□□ -0.61
TMEM260-208ENST00000555905 MRPS25P82663 173 aaKnown RBP11.26□□□□□ -0.61
TMEM260-208ENST00000555905 PTK6Q13882 451 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 P3H1Q32P28 736 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 PLEKHG6Q3KR16 790 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 PITRM1Q5JRX3 1037 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 GRAMD4Q6IC98 578 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 RETSATQ6NUM9 610 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 ARHGEF18Q6ZSZ5 1173 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 AHI1Q8N157 1196 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms