RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 TMEM59LQ9UK28 342 aa13.04□□□□□ -0.32
HNRNPC-221ENST00000555883 NUMA1Q14980 2115 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 SRRM3A6NNA2 597 aaPredicted RBP13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 I6L893 689 aaPredicted RBP13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 MAGEC1O60732 1142 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 ENDOD1O94919 500 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 CDK4P11802 303 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 VAV1P15498 845 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 SULT1E1P49888 294 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 IRAK1P51617 712 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 NOMO3P69849 1222 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 CCDC15Q0P6D6 951 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 C6orf118Q5T5N4 469 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 FAM102AQ5T9C2 384 aaPredicted RBP13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 AGBL4Q5VU57 503 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 CDKAL1Q5VV42 579 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 NAPEPLDQ6IQ20 393 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 NEK5Q6P3R8 708 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 LAYNQ6UX15 382 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 C14orf80Q86SX3 495 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 GALNT15Q8N3T1 639 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 PNPLA1Q8N8W4 532 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 MFSD2AQ8NA29 543 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 SIK2Q9H0K1 926 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 MUC3BQ9H195 1237 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 PREBQ9HCU5 417 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 ANLNQ9NQW6 1124 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 GDF3Q9NR23 364 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 ARHGAP20Q9P2F6 1191 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 DKK4Q9UBT3 224 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 BTBD3Q9Y2F9 522 aa13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 FARP1Q9Y4F1 1045 aaPredicted RBP13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 COL5A1P20908 1838 aaPredicted RBP13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 NYNRINQ9P2P1 1898 aaKnown RBP13.03□□□□□ -0.32
HNRNPC-221ENST00000555883 LAMA5O15230 3695 aa13.02□□□□□ -0.32
HNRNPC-221ENST00000555883 TBC1D3DA0A087WVF3 549 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 TBC1D3IA0A087WXS9 549 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 TBC1D3EA0A087X179 549 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 TBC1D3KA0A087X1G2 549 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 TBC1D3FA6NER0 549 aaPredicted RBP13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 TBC1D3LB9A6J9 549 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 RNGTTO60942 597 aaKnown RBP13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 WNT1P04628 370 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 RHOCP08134 193 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 TBC1D3HP0C7X1 549 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 SRCP12931 536 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 TFE3P19532 575 aaPredicted RBP13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 FLT3P36888 993 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 RXRGP48443 463 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 ARRB1P49407 418 aaPredicted RBP13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 NXPH1P58417 271 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 NRG1Q02297 640 aaPredicted RBP13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 ACCSLQ4AC99 568 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 ALFQ53S48 1182 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 ARTNQ5T4W7 220 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 TBC1D3GQ6DHY5 549 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 TBC1D3CQ6IPX1 549 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 RBM43Q6ZSC3 357 aaKnown RBP13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 Q6ZVU0 165 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 NOP9Q86U38 636 aaKnown RBP13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 PRPF39Q86UA1 669 aaKnown RBP13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 PROSER1Q86XN7 944 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 TBC1D3Q8IZP1 549 aaPredicted RBP13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 TMIEQ8NEW7 156 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 PIP4K2CQ8TBX8 421 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 SERAC1Q96JX3 654 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 TBCBQ99426 244 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 PSMB7Q99436 277 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 GANQ9H2C0 597 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 AASDHPPTQ9NRN7 309 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 PPARGC1AQ9UBK2 798 aaKnown RBP13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 ZNF212Q9UDV6 495 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 VPS51Q9UID3 782 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 NOCTQ9UK39 431 aaKnown RBP13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 SARDHQ9UL12 918 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 PCDHGA1Q9Y5H4 931 aa13.02□□□□□ -0.33
HNRNPC-221ENST00000555883 DSPP15924 2871 aaKnown RBP13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 ILVBLA1L0T0 632 aa13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 E9PAM4 449 aa13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 TLR4O00206 839 aa13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 PES1O00541 588 aaKnown RBP13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 CNTN5O94779 1100 aa13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 PRNPP04156 253 aa13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 CYP1A1P04798 512 aaPredicted RBP13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 TPM2P07951 284 aa13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 MMEP08473 750 aa13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 C1SP09871 688 aa13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 ATXN1LP0C7T5 689 aaKnown RBP13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 MMP8P22894 467 aa13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 GGCXP38435 758 aa13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 GSCP56915 257 aaPredicted RBP13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 RNASE9P60153 205 aaKnown RBP13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 PPP2CBP62714 309 aa13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 PPP2CAP67775 309 aa13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 CDR2Q01850 454 aa13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 SLC20A2Q08357 652 aa13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 SMAD1Q15797 465 aaKnown RBP13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 HSP90AA4PQ58FG1 418 aa13.01□□□□□ -0.33
HNRNPC-221ENST00000555883 TRIM72Q6ZMU5 477 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms