RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 SPAG6O75602 509 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 ASGR2P07307 311 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 ETS1P14921 441 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 PFKLP17858 780 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 ATP5C1P36542 298 aaKnown RBP17.81■□□□□ 0.44
SHOX-204ENST00000554971 SCNN1AP37088 669 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 CCDC15Q0P6D6 951 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 EFEMP1Q12805 493 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 TMED2Q15363 201 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 EFHC1Q5JVL4 640 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 RNF43Q68DV7 783 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 C4orf22Q6V702 233 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 BEND5Q7L4P6 421 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 RFX6Q8HWS3 928 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 PDIK1LQ8N165 341 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 PYROXD1Q8WU10 500 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 CPT1BQ92523 772 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 ALKBH8Q96BT7 664 aaKnown RBP17.81■□□□□ 0.44
SHOX-204ENST00000554971 TBCBQ99426 244 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 KXD1Q9BQD3 176 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 KCNK12Q9HB15 430 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 TBK1Q9UHD2 729 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 SFMBT1Q9UHJ3 866 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 ARHGAP26Q9UNA1 814 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 CPQQ9Y646 472 aa17.81■□□□□ 0.44
SHOX-204ENST00000554971 CFAP69A5D8W1 941 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 ASMTLO95671 621 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 TFE3P19532 575 aaPredicted RBP17.8■□□□□ 0.44
SHOX-204ENST00000554971 RPL22P35268 128 aaKnown RBP17.8■□□□□ 0.44
SHOX-204ENST00000554971 GALNTL6Q49A17 601 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 TJAP1Q5JTD0 557 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 OTUD1Q5VV17 481 aaPredicted RBP17.8■□□□□ 0.44
SHOX-204ENST00000554971 MSANTD2Q6P1R3 559 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 PRUNE1Q86TP1 453 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 MIB1Q86YT6 1006 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 DEFB106AQ8N104 65 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 EMC1Q8N766 993 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 ADAM32Q8TC27 787 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 TEKT4Q8WW24 435 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 TRABDQ9H4I3 376 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 KLHL14Q9P2G3 628 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 STARD13Q9Y3M8 1113 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.8■□□□□ 0.44
SHOX-204ENST00000554971 C2CD4BA6NLJ0 364 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 MSI1O43347 362 aaKnown RBP17.8■□□□□ 0.44
SHOX-204ENST00000554971 GREM1O60565 184 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 MBL2P11226 248 aaPredicted RBP17.8■□□□□ 0.44
SHOX-204ENST00000554971 EIF3EP60228 445 aaKnown RBP17.8■□□□□ 0.44
SHOX-204ENST00000554971 EIF4EBP2Q13542 120 aaPredicted RBP17.8■□□□□ 0.44
SHOX-204ENST00000554971 DCAF6Q58WW2 860 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 CYB5D1Q6P9G0 228 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 VITQ6UXI7 678 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 PLCD3Q8N3E9 789 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 DQX1Q8TE96 717 aaKnown RBP17.8■□□□□ 0.44
SHOX-204ENST00000554971 DHRS4Q9BTZ2 278 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 KLF16Q9BXK1 252 aaPredicted RBP17.8■□□□□ 0.44
SHOX-204ENST00000554971 ACSS3Q9H6R3 686 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 DNMT3LQ9UJW3 386 aa17.8■□□□□ 0.44
SHOX-204ENST00000554971 CHUKO15111 745 aa17.79■□□□□ 0.44
SHOX-204ENST00000554971 DAB1O75553 588 aa17.79■□□□□ 0.44
SHOX-204ENST00000554971 IGLV3-25P01717 112 aa17.79■□□□□ 0.44
SHOX-204ENST00000554971 KRT15P19012 456 aa17.79■□□□□ 0.44
SHOX-204ENST00000554971 TAC1P20366 129 aa17.79■□□□□ 0.44
SHOX-204ENST00000554971 NOMO1Q15155 1222 aa17.79■□□□□ 0.44
SHOX-204ENST00000554971 ZNF77Q15935 545 aa17.79■□□□□ 0.44
SHOX-204ENST00000554971 ADGRD1Q6QNK2 874 aa17.79■□□□□ 0.44
SHOX-204ENST00000554971 SH3RF2Q8TEC5 729 aa17.79■□□□□ 0.44
SHOX-204ENST00000554971 NT5C3BQ969T7 300 aa17.79■□□□□ 0.44
SHOX-204ENST00000554971 HAUS1Q96CS2 278 aa17.79■□□□□ 0.44
SHOX-204ENST00000554971 PITPNM3Q9BZ71 974 aa17.79■□□□□ 0.44
SHOX-204ENST00000554971 SMOC2Q9H3U7 446 aa17.79■□□□□ 0.44
SHOX-204ENST00000554971 ZFP14Q9HCL3 533 aa17.79■□□□□ 0.44
SHOX-204ENST00000554971 MARCH2Q9P0N8 246 aa17.79■□□□□ 0.44
SHOX-204ENST00000554971 RABGEF1Q9UJ41 708 aa17.79■□□□□ 0.44
SHOX-204ENST00000554971 TICRRQ7Z2Z1 1910 aa17.79■□□□□ 0.44
SHOX-204ENST00000554971 HEPACAM2A8MVW5 462 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 LEFTY2O00292 366 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 SCAMP3O14828 347 aaKnown RBP17.78■□□□□ 0.44
SHOX-204ENST00000554971 MGRN1O60291 552 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 ZWINTO95229 277 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 RBP3P10745 1247 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 SKIV2L2P42285 1042 aaKnown RBP17.78■□□□□ 0.44
SHOX-204ENST00000554971 MATKP42679 507 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 USP4Q13107 963 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 DPYSL3Q14195 570 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 SMTNL2Q2TAL5 461 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 KCNT1Q5JUK3 1230 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 ARCQ7LC44 396 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 TAC4Q86UU9 113 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 PARP9Q8IXQ6 854 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 ELSPBP1Q96BH3 223 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 CDK5RAP1Q96SZ6 601 aaKnown RBP17.78■□□□□ 0.44
SHOX-204ENST00000554971 NACA2Q9H009 215 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 COL4A2P08572 1712 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 POC1B-GALNT4F8VUJ3 575 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 CAPN9O14815 690 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 PRPSAP2O60256 369 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 ECI2O75521 394 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 PDGFRAP16234 1089 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 TGM2P21980 687 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms