RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 PDK1Q15118 436 aa16.81■□□□□ 0.28
SPTLC2-203ENST00000554901 HSF5Q4G112 596 aaPredicted RBP16.81■□□□□ 0.28
SPTLC2-203ENST00000554901 CCDC181Q5TID7 509 aa16.81■□□□□ 0.28
SPTLC2-203ENST00000554901 TMEM215Q68D42 235 aa16.81■□□□□ 0.28
SPTLC2-203ENST00000554901 AADACL2Q6P093 401 aa16.81■□□□□ 0.28
SPTLC2-203ENST00000554901 TRIM67Q6ZTA4 783 aa16.81■□□□□ 0.28
SPTLC2-203ENST00000554901 METTL3Q86U44 580 aaKnown RBP16.81■□□□□ 0.28
SPTLC2-203ENST00000554901 ZNF687Q8N1G0 1237 aa16.81■□□□□ 0.28
SPTLC2-203ENST00000554901 HDAC11Q96DB2 347 aa16.81■□□□□ 0.28
SPTLC2-203ENST00000554901 OLFM3Q96PB7 478 aa16.81■□□□□ 0.28
SPTLC2-203ENST00000554901 TSGA13Q96PP4 275 aa16.81■□□□□ 0.28
SPTLC2-203ENST00000554901 SPON2Q9BUD6 331 aa16.81■□□□□ 0.28
SPTLC2-203ENST00000554901 RNF14Q9UBS8 474 aa16.81■□□□□ 0.28
SPTLC2-203ENST00000554901 HEY1Q9Y5J3 304 aa16.81■□□□□ 0.28
SPTLC2-203ENST00000554901 K7EQS6 105 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 PPP1R12AO14974 1030 aaPredicted RBP16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 ZMPSTE24O75844 475 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 SLC34A2O95436 690 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 HNRNPLP14866 589 aaKnown RBP eCLIP16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 GARSP41250 739 aaKnown RBP16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 ECT2LQ008S8 904 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 XRCC4Q13426 336 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 ATPAF2Q8N5M1 289 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 ACTRT1Q8TDG2 376 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 CASKIN2Q8WXE0 1202 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 ZNF599Q96NL3 588 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 HERPUD2Q9BSE4 406 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 CIPCQ9C0C6 399 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 TBC1D17Q9HA65 648 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 VPS51Q9UID3 782 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 PLA2G4CQ9UP65 541 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 HS3ST2Q9Y278 367 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 VCANP13611 3396 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 CBX4O00257 560 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 DFFAO00273 331 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 FANCGO15287 622 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 PRAMEF11O60813 436 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 EGFP01133 1207 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 FGGP02679 453 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 CD72P21854 359 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 NNMTP40261 264 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 KIR2DL1P43626 348 aaPredicted RBP16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 CLCN6P51797 869 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 MRPS21P82921 87 aaKnown RBP16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 IL10RBQ08334 325 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 SLC10A2Q12908 348 aaPredicted RBP16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 NOMO1Q15155 1222 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 LLGL1Q15334 1064 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 INO80DQ53TQ3 878 aaPredicted RBP16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 TMCO4Q5TGY1 634 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 TIGD7Q6NT04 549 aaPredicted RBP16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 TRMT11Q7Z4G4 463 aaKnown RBP16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 ZNF354CQ86Y25 554 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 EZH1Q92800 747 aaPredicted RBP16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 IPO11Q9UI26 975 aaKnown RBP16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 SLC25A13Q9UJS0 675 aa16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 NDRG2Q9UN36 371 aaKnown RBP16.8■□□□□ 0.28
SPTLC2-203ENST00000554901 HACD1B0YJ81 288 aa16.79■□□□□ 0.28
SPTLC2-203ENST00000554901 PGRMC1O00264 195 aaKnown RBP16.79■□□□□ 0.28
SPTLC2-203ENST00000554901 ZNF500O60304 480 aaPredicted RBP16.79■□□□□ 0.28
SPTLC2-203ENST00000554901 MAFKO60675 156 aa16.79■□□□□ 0.28
SPTLC2-203ENST00000554901 CHRNB1P11230 501 aa16.79■□□□□ 0.28
SPTLC2-203ENST00000554901 PECAM1P16284 738 aaPredicted RBP16.79■□□□□ 0.28
SPTLC2-203ENST00000554901 CCNCP24863 283 aa16.79■□□□□ 0.28
SPTLC2-203ENST00000554901 TARSP26639 723 aaKnown RBP16.79■□□□□ 0.28
SPTLC2-203ENST00000554901 ST8SIA6P61647 398 aa16.79■□□□□ 0.28
SPTLC2-203ENST00000554901 RFTN1Q14699 578 aaPredicted RBP16.79■□□□□ 0.28
SPTLC2-203ENST00000554901 COG1Q8WTW3 980 aa16.79■□□□□ 0.28
SPTLC2-203ENST00000554901 SP110Q9HB58 689 aa16.79■□□□□ 0.28
SPTLC2-203ENST00000554901 PDFQ9HBH1 243 aa16.79■□□□□ 0.28
SPTLC2-203ENST00000554901 HOMER3Q9NSC5 361 aa16.79■□□□□ 0.28
SPTLC2-203ENST00000554901 THAP10Q9P2Z0 257 aaPredicted RBP16.79■□□□□ 0.28
SPTLC2-203ENST00000554901 SLC8A2Q9UPR5 921 aa16.79■□□□□ 0.28
SPTLC2-203ENST00000554901 ERVW-1Q9UQF0 538 aa16.79■□□□□ 0.28
SPTLC2-203ENST00000554901 MIA3Q5JRA6 1907 aa16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 A0A0C4DFX4 3053 aa16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 FAM170BA6NMN3 283 aa16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 MTSS1O43312 755 aa16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 SNAP91O60641 907 aa16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 MAGEA9P43362 315 aa16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 ARF5P84085 180 aa16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 OTUD4Q01804 1114 aaKnown RBP16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 PPIDQ08752 370 aaKnown RBP16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 ENPP2Q13822 863 aa16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 UBXN2BQ14CS0 331 aa16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 PTPRNQ16849 979 aa16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 LONRF2Q1L5Z9 754 aa16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 NPNTQ6UXI9 565 aa16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 TP53INP2Q8IXH6 220 aa16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 ZNF513Q8N8E2 541 aaPredicted RBP16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 PJA1Q8NG27 643 aa16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 ACTL9Q8TC94 416 aa16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 NSMCE1Q8WV22 266 aa16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 CLDN23Q96B33 292 aa16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 HAUS1Q96CS2 278 aa16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 IER2Q9BTL4 223 aa16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 MFSD1Q9H3U5 465 aa16.78■□□□□ 0.28
SPTLC2-203ENST00000554901 TRIOO75962 3097 aa16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 ESPNB1AK53 854 aa16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 MCF2LO15068 1137 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms