RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 DAZAP1Q96EP5 407 aaKnown RBP1.71□□□□□ -2.14
PRPF39-208ENST00000554785 EDC3Q96F86 508 aaKnown RBP1.71□□□□□ -2.14
PRPF39-208ENST00000554785 RITA1Q96K30 269 aa1.71□□□□□ -2.14
PRPF39-208ENST00000554785 UBXN10Q96LJ8 280 aa1.71□□□□□ -2.14
PRPF39-208ENST00000554785 SNX18Q96RF0 628 aa1.71□□□□□ -2.14
PRPF39-208ENST00000554785 MMS19Q96T76 1030 aa1.71□□□□□ -2.14
PRPF39-208ENST00000554785 ADGRE3Q9BY15 652 aa1.71□□□□□ -2.14
PRPF39-208ENST00000554785 SAGE1Q9NXZ1 904 aa1.71□□□□□ -2.14
PRPF39-208ENST00000554785 RRN3Q9NYV6 651 aa1.71□□□□□ -2.14
PRPF39-208ENST00000554785 FEM1BQ9UK73 627 aa1.71□□□□□ -2.14
PRPF39-208ENST00000554785 RAB21Q9UL25 225 aa1.71□□□□□ -2.14
PRPF39-208ENST00000554785 CACNA1SQ13698 1873 aa1.71□□□□□ -2.14
PRPF39-208ENST00000554785 HTTP42858 3142 aa1.71□□□□□ -2.14
PRPF39-208ENST00000554785 CASP8AP2Q9UKL3 1982 aa1.71□□□□□ -2.14
PRPF39-208ENST00000554785 ARHGEF10O15013 1369 aa1.71□□□□□ -2.14
PRPF39-208ENST00000554785 HFM1A2PYH4 1435 aa1.71□□□□□ -2.14
PRPF39-208ENST00000554785 NRXN1Q9ULB1 1477 aa1.71□□□□□ -2.14
PRPF39-208ENST00000554785 PAPPAQ13219 1627 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TBC1D3DA0A087WVF3 549 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TBC1D3IA0A087WXS9 549 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TBC1D3EA0A087X179 549 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TBC1D3KA0A087X1G2 549 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 SMIM35A0A1B0GVV1 85 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TCRBV5S1A1TA0A578 114 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TBC1D3BA6NDS4 549 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TBC1D3FA6NER0 549 aaPredicted RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 SLC38A8A6NNN8 435 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TBC1D3LB9A6J9 549 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 M0QYT0 321 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 CLIC1O00299 241 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 PPP6CO00743 305 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 MT-CO3P00414 261 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 MBPP02686 304 aaPredicted RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TK1P04183 234 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TBC1D3HP0C7X1 549 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 RXRAP19793 462 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 MATN1P21941 496 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 PAX3P23760 479 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 DUSP1P28562 367 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 SERPINA4P29622 427 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 GRK5P34947 590 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 ARHGAP25P42331 645 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 PAPOLAP51003 745 aaKnown RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 RBM5P52756 815 aaKnown RBP eCLIP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 FAM3BP58499 235 aaPredicted RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 RPL15P61313 204 aaKnown RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 RAE1P78406 368 aaKnown RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 HOXA4Q00056 320 aaPredicted RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 EFR3AQ14156 821 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 ALFQ53S48 1182 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TBC1D3GQ6DHY5 549 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TBC1D3CQ6IPX1 549 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 WDR93Q6P2C0 686 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 C16orf89Q6UX73 402 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TRIM72Q6ZMU5 477 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 SYT13Q7L8C5 426 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 HERC6Q8IVU3 1022 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TBC1D3Q8IZP1 549 aaPredicted RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TCP11L2Q8N4U5 519 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 LINC01465Q8N7H1 131 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 PNLDC1Q8NA58 520 aaKnown RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 C8orf58Q8NAV2 365 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 MAFAQ8NHW3 353 aaPredicted RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 GLMPQ8WWB7 406 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 EVI5LQ96CN4 794 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 CCDC17Q96LX7 622 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 C5orf34Q96MH7 638 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 HS6ST2Q96MM7 605 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 PRAM1Q96QH2 718 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 PYM1Q9BRP8 204 aaKnown RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TWSG1Q9GZX9 223 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 CDCP1Q9H5V8 836 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 CHODLQ9H9P2 273 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 G6PC2Q9NQR9 355 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 ABHD10Q9NUJ1 306 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 GAR1Q9NY12 217 aaKnown RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 ASIC5Q9NY37 505 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 KCND3Q9UK17 655 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 BAG5Q9UL15 447 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 FZD4Q9ULV1 537 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 SLC12A4Q9UP95 1085 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 ADGRF5Q8IZF2 1346 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 PKD1L3Q7Z443 1732 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 COL5A2P05997 1499 aaPredicted RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TTC3P53804 2025 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 NHSQ6T4R5 1651 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 KNDC1Q76NI1 1749 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 MBD3L5A6NJ08 208 aaPredicted RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TTC34A8MYJ7 566 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 KCNU1A8MYU2 1149 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 BTBD19C9JJ37 291 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 H3BNC9 293 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 H7C1Q1 480 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 FYB1O15117 783 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 NCAM2O15394 837 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 GCATO75600 419 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TOMM70O94826 608 aa1.7□□□□□ -2.14
PRPF39-208ENST00000554785 TFRCP02786 760 aaKnown RBP1.7□□□□□ -2.14
PRPF39-208ENST00000554785 SLC3A2P08195 630 aaKnown RBP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms